Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997434

Identifier: 121997434

GI number: 121997434

Start: 713008

End: 713310

Strand: Reverse

Name: 121997434

Synonym: Hhal_0635

Alternate gene names: NA

Gene position: 713310-713008 (Counterclockwise)

Preceding gene: 121997436

Following gene: 121997433

Centisome position: 26.63

GC content: 60.4

Gene sequence:

>303_bases
ATGACAGTATGGTTCGTATCCCGTCATCCCGGGGCTACAGAGTGGGCTAAGCGGCAGGGATTCGATGTCGATCGGCAGGT
CGAGCACCTGGATGTCGAGCAGGTCGCAGCCGGCGATACAGTGATCGGTACACTCCCCGTGCACCTTGCCGAAGGGGTCT
GTTGCCGTGGCGCGTGGTATTGCCACTTGATTCTGGATATCCCTCCGGAGCGCCGGGGCCGAGAGCTCAGTGCCGATGAG
ATGGACGGCATGGATGCCCGACTCGCGTATTATCACGTGCAGCAGGTCAAGGCTGACAGATGA

Upstream 100 bases:

>100_bases
GTGATGCGCGGCGCGGGCCGATGGCGTAGGCGGCTGATGCACAGAGACCGGGAACCCCCGGGCGGAGCAAGCCCCGGGTC
ACTCCTTTGCAGGAAATGAC

Downstream 100 bases:

>100_bases
AAAGGGTACCCGGAGATCTTGGGCGTGAGCTGATTCGCACCTGCCGCCGACTGGGATTTCGAACCGGCAAGGCGCTGGTC
GTTGTTCTGCTTGTGCTGCT

Product: CRISPR-associated protein VVA1548 family

Products: NA

Alternate protein names: CRISPR-Associated Family

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTVWFVSRHPGATEWAKRQGFDVDRQVEHLDVEQVAAGDTVIGTLPVHLAEGVCCRGAWYCHLILDIPPERRGRELSADE
MDGMDARLAYYHVQQVKADR

Sequences:

>Translated_100_residues
MTVWFVSRHPGATEWAKRQGFDVDRQVEHLDVEQVAAGDTVIGTLPVHLAEGVCCRGAWYCHLILDIPPERRGRELSADE
MDGMDARLAYYHVQQVKADR
>Mature_99_residues
TVWFVSRHPGATEWAKRQGFDVDRQVEHLDVEQVAAGDTVIGTLPVHLAEGVCCRGAWYCHLILDIPPERRGRELSADEM
DGMDARLAYYHVQQVKADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11348; Mature: 11217

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVWFVSRHPGATEWAKRQGFDVDRQVEHLDVEQVAAGDTVIGTLPVHLAEGVCCRGAWY
CEEEEEECCCCCCCHHHHCCCCCCCHHHHCCHHHHCCCCEEEEEECHHHHCCEEECCCEE
CHLILDIPPERRGRELSADEMDGMDARLAYYHVQQVKADR
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVWFVSRHPGATEWAKRQGFDVDRQVEHLDVEQVAAGDTVIGTLPVHLAEGVCCRGAWY
EEEEEECCCCCCCHHHHCCCCCCCHHHHCCHHHHCCCCEEEEEECHHHHCCEEECCCEE
CHLILDIPPERRGRELSADEMDGMDARLAYYHVQQVKADR
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA