Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997436

Identifier: 121997436

GI number: 121997436

Start: 715691

End: 716392

Strand: Reverse

Name: 121997436

Synonym: Hhal_0637

Alternate gene names: NA

Gene position: 716392-715691 (Counterclockwise)

Preceding gene: 121997437

Following gene: 121997434

Centisome position: 26.75

GC content: 64.53

Gene sequence:

>702_bases
ATGCGGTACCTGAAGATCTTGGCCCTAACCGTGTTGGTGCCCCTTGGCTGCTCCAAGGGGGTCGAGGGCTTTCCGCAAGT
ATCGGTCCTCATTGACGGAGATCCCGTCGAGGTCCGGCTCGCGGCCACCCCCGAGACCCGGGCCAGGGGGTTTCAGCACG
CCAGCCCGGGGCAGATCCGGTCGGAGCGGATCCTGTTTACATGGCCGGAGGAGAGCGAGCCCGTCTTCCACATGGACAAT
TTGGCGGCTCCGCTGAAGATAGCCTGGATCGCCGACGGTGAGGTTATCGCCCTCGAGCGCATGACGCCCGGGCGCGGTCA
GTATCGGCCGCCCGAGCCGGTGGATGCCGCATTGGAGCTGGCGCCTGAGGAAGCAGAGCAGCTCGGTATCGAGTCGGGAT
CCATGGTCCGCGTTCGGAGGGTGGGGTGTGTTCCGCAAGATTGCCGCTACCGCTGTCCTGTCGCCCTCTGTGCCAATCTG
CTGCCAAGCCTGCAGCAGGGGAGCAAAGGAGTGGGGACGCTCTATATCGACCGGCGTGGGACGAGGTTGGAAGTCGCGAA
TAAAGCGCTTTTCAGCCGCTGGGAGGTACATGCCGGTTTGCACCGGCGCTGGCAGCGCCGTGCTGCTCAAGCCTTGGCAG
CCGAGTGCGTCTATCTCGGTACGCCAGCGATTGCGGAGAACGGCGATGTCCACGGCGCTTGA

Upstream 100 bases:

>100_bases
AAGCCGGATGACGCGGGCCCTCATGGCCCCCATAGGGTTTCTGGAGCCGGCGTGATCGGCAAAGGCGCCGTGACCCATCC
GGTTGGTGGAGACCGTGCCG

Downstream 100 bases:

>100_bases
GTTGCTCATCCGCAAGCAGGCCCGCGCCCGTGGGCTCTCGCTCTCCGAAGTGGCCCGCCGGGCAGGGATCAGTCGCCAGA
GTCTCTACGACCTTTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRYLKILALTVLVPLGCSKGVEGFPQVSVLIDGDPVEVRLAATPETRARGFQHASPGQIRSERILFTWPEESEPVFHMDN
LAAPLKIAWIADGEVIALERMTPGRGQYRPPEPVDAALELAPEEAEQLGIESGSMVRVRRVGCVPQDCRYRCPVALCANL
LPSLQQGSKGVGTLYIDRRGTRLEVANKALFSRWEVHAGLHRRWQRRAAQALAAECVYLGTPAIAENGDVHGA

Sequences:

>Translated_233_residues
MRYLKILALTVLVPLGCSKGVEGFPQVSVLIDGDPVEVRLAATPETRARGFQHASPGQIRSERILFTWPEESEPVFHMDN
LAAPLKIAWIADGEVIALERMTPGRGQYRPPEPVDAALELAPEEAEQLGIESGSMVRVRRVGCVPQDCRYRCPVALCANL
LPSLQQGSKGVGTLYIDRRGTRLEVANKALFSRWEVHAGLHRRWQRRAAQALAAECVYLGTPAIAENGDVHGA
>Mature_233_residues
MRYLKILALTVLVPLGCSKGVEGFPQVSVLIDGDPVEVRLAATPETRARGFQHASPGQIRSERILFTWPEESEPVFHMDN
LAAPLKIAWIADGEVIALERMTPGRGQYRPPEPVDAALELAPEEAEQLGIESGSMVRVRRVGCVPQDCRYRCPVALCANL
LPSLQQGSKGVGTLYIDRRGTRLEVANKALFSRWEVHAGLHRRWQRRAAQALAAECVYLGTPAIAENGDVHGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25554; Mature: 25554

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLKILALTVLVPLGCSKGVEGFPQVSVLIDGDPVEVRLAATPETRARGFQHASPGQIR
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCCCCCCCCCC
SERILFTWPEESEPVFHMDNLAAPLKIAWIADGEVIALERMTPGRGQYRPPEPVDAALEL
CCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHC
APEEAEQLGIESGSMVRVRRVGCVPQDCRYRCPVALCANLLPSLQQGSKGVGTLYIDRRG
CCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
TRLEVANKALFSRWEVHAGLHRRWQRRAAQALAAECVYLGTPAIAENGDVHGA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRYLKILALTVLVPLGCSKGVEGFPQVSVLIDGDPVEVRLAATPETRARGFQHASPGQIR
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCCCCCCCCCC
SERILFTWPEESEPVFHMDNLAAPLKIAWIADGEVIALERMTPGRGQYRPPEPVDAALEL
CCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHC
APEEAEQLGIESGSMVRVRRVGCVPQDCRYRCPVALCANLLPSLQQGSKGVGTLYIDRRG
CCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
TRLEVANKALFSRWEVHAGLHRRWQRRAAQALAAECVYLGTPAIAENGDVHGA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA