Click here to switch to the map view.

The map label for this gene is 121997424

Identifier: 121997424

GI number: 121997424

Start: 701072

End: 701383

Strand: Reverse

Name: 121997424

Synonym: Hhal_0624

Alternate gene names: NA

Gene position: 701383-701072 (Counterclockwise)

Preceding gene: 121997433

Following gene: 121997423

Centisome position: 26.19

GC content: 64.74

Gene sequence:

>312_bases
ATGACGACTTGGTTCGTGACCCGTCACTCGGGGGCTGTGGAATGGGCCCAGCGCCGGGGCCTGGCGGTTGATCGGCAGGT
GGATCATCTAAATCCGGCCGAGCTGGAGGTTGGGGATAGGGTGATCGGAACGCTCCCCGTGCATCTTGCGGCCGCTGTAT
GCGAGCGTGGTGGGCGGTATCTCCATCTGTCGCTGGATCTCCCACCGCAGTTGCGCGGCCAAGAACTAACCGCCGACGAC
ATGGAGGCCGCTGGCGCCCGTCTCGAGGCCTACCGTGTAGAGAGCCTGGGCGAAGTGGAACCGGGCAACTGA

Upstream 100 bases:

>100_bases
CGAAAAGGGTCTACCGTGACGGGCACCCTGAGGCGGCTGCCAACGAGGTAAAGAGGCCGGCTGACCCAAAGGAAGGTAAG
GAAAAGGAGACAGCACCACC

Downstream 100 bases:

>100_bases
TGCCCTATCACTCGAAGGAGACCAATCCCATGACCCGACTCCACATCCAGCTGGTGTCTGCCCAGCTTGCCGGCAATCTG
ATACCCGCGCTCATGGAGCG

Product: CRISPR-associated protein VVA1548 family

Products: NA

Alternate protein names: CRISPR-Associated Family

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTTWFVTRHSGAVEWAQRRGLAVDRQVDHLNPAELEVGDRVIGTLPVHLAAAVCERGGRYLHLSLDLPPQLRGQELTADD
MEAAGARLEAYRVESLGEVEPGN

Sequences:

>Translated_103_residues
MTTWFVTRHSGAVEWAQRRGLAVDRQVDHLNPAELEVGDRVIGTLPVHLAAAVCERGGRYLHLSLDLPPQLRGQELTADD
MEAAGARLEAYRVESLGEVEPGN
>Mature_102_residues
TTWFVTRHSGAVEWAQRRGLAVDRQVDHLNPAELEVGDRVIGTLPVHLAAAVCERGGRYLHLSLDLPPQLRGQELTADDM
EAAGARLEAYRVESLGEVEPGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11314; Mature: 11183

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWFVTRHSGAVEWAQRRGLAVDRQVDHLNPAELEVGDRVIGTLPVHLAAAVCERGGRY
CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEHHHHHHHHHHHHCCCCE
LHLSLDLPPQLRGQELTADDMEAAGARLEAYRVESLGEVEPGN
EEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTWFVTRHSGAVEWAQRRGLAVDRQVDHLNPAELEVGDRVIGTLPVHLAAAVCERGGRY
CEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEHHHHHHHHHHHHCCCCE
LHLSLDLPPQLRGQELTADDMEAAGARLEAYRVESLGEVEPGN
EEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA