Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997423

Identifier: 121997423

GI number: 121997423

Start: 699885

End: 701042

Strand: Reverse

Name: 121997423

Synonym: Hhal_0623

Alternate gene names: NA

Gene position: 701042-699885 (Counterclockwise)

Preceding gene: 121997424

Following gene: 121997422

Centisome position: 26.17

GC content: 64.59

Gene sequence:

>1158_bases
ATGACCCGACTCCACATCCAGCTGGTGTCTGCCCAGCTTGCCGGCAATCTGATACCCGCGCTCATGGAGCGCCCGGAGCA
TGCGGCTCTCATTGTTACGCCGGCCATGGCCGGGCAGGCTCAGTTGCTCCGCAAGCTGGAAGAAGAGGCCGGTATTGCGG
TTCAGACCTTCGAGAATGCCCCGGATGCCGACCTGCCCCAGTTGCACGAATTCGCCCTGGGGATCTTGGAAGAGTTGCCG
GCGGCGGACGAGGTGGTCCTCAATCTGACGGGCGGCAACAAGCTCATGGCTCTGGGGTTTCTCGAGATGCTGCGGGATAG
TGTACACCGCCGGATCTACACCGATACCGCCCATGGCCGGTTGGAGCACTTGCCGGAGGGGAATGAACGGGCCGAGGCGC
CGACGCCACAGACCTCGGTGCTTGACGTGCCAATCAGCCTGCGCGCCCAGGGGTTTCGCTACCACCGTGCTGCCTCCGCG
GACGAGGACTGGCAGCGTGAGGCTGGCGAGCGCAAGCAGGTGGCCAAGAGGCTAGCGGAGGTCGCCAGGGACCATGGCGA
TTTCCTGGGTGCGCTGAATGCGGTCGCTTCCCGGTCTCTGGACAGGGAGGGGCGGCTGGTCGCGCGTGACCAGGCCTTCG
ATGACCCACCGTACGGCCGCTGGGCCAATAATCTGGGCTGGCTCCGCGACCAGGGCTTGCTGGACTGGGAGGGTGGTGCC
GAGGTGACCTTCCTCGACGAGGAGCGGACTCGCTTTCTCAACGGCGGCTGGCTGGAGGAGTATGTCTACCACCGGCTCCG
GGATGAGGGGCTCGACGATGTGGCCATGGGGGTGGAAGGCACCTGGGAAGGTACCGACAAGGCCCGCAACGAACTAGATG
TGGTTGCCATCCATGTCAATCGTCTGTTGGTGGTGGAGTGCAAGACCCTGCGCCACGGCAACGAAGCCGCCGATGACCAG
CAACTCTACAAGCTGGACAGCATCGGCGATAACCTGCGCGGCTTCTTCGGTACCAGTTGGATGGTCAGCGCCCGGCAGCC
GACGGATATTATGCGAGAGCGCGCCCGGCAGCATCGGATCCGACTCATTGGCCCGGATGAGCTGCCCCGGCTGCGGGATA
TCGTCCGGGAGTGGAAGGCGCACGTGGAGCCCTGCTGA

Upstream 100 bases:

>100_bases
TGGAGGCCGCTGGCGCCCGTCTCGAGGCCTACCGTGTAGAGAGCCTGGGCGAAGTGGAACCGGGCAACTGATGCCCTATC
ACTCGAAGGAGACCAATCCC

Downstream 100 bases:

>100_bases
TTGCGCTTGGCGCTGAGCAGAGCCCTTAAGTGCTCCATGAGCCGCTGAGCAGTGTCTTCAACCAATTTCTGCCACCCTCC
GCGGAGTAGTGGTCGCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTRLHIQLVSAQLAGNLIPALMERPEHAALIVTPAMAGQAQLLRKLEEEAGIAVQTFENAPDADLPQLHEFALGILEELP
AADEVVLNLTGGNKLMALGFLEMLRDSVHRRIYTDTAHGRLEHLPEGNERAEAPTPQTSVLDVPISLRAQGFRYHRAASA
DEDWQREAGERKQVAKRLAEVARDHGDFLGALNAVASRSLDREGRLVARDQAFDDPPYGRWANNLGWLRDQGLLDWEGGA
EVTFLDEERTRFLNGGWLEEYVYHRLRDEGLDDVAMGVEGTWEGTDKARNELDVVAIHVNRLLVVECKTLRHGNEAADDQ
QLYKLDSIGDNLRGFFGTSWMVSARQPTDIMRERARQHRIRLIGPDELPRLRDIVREWKAHVEPC

Sequences:

>Translated_385_residues
MTRLHIQLVSAQLAGNLIPALMERPEHAALIVTPAMAGQAQLLRKLEEEAGIAVQTFENAPDADLPQLHEFALGILEELP
AADEVVLNLTGGNKLMALGFLEMLRDSVHRRIYTDTAHGRLEHLPEGNERAEAPTPQTSVLDVPISLRAQGFRYHRAASA
DEDWQREAGERKQVAKRLAEVARDHGDFLGALNAVASRSLDREGRLVARDQAFDDPPYGRWANNLGWLRDQGLLDWEGGA
EVTFLDEERTRFLNGGWLEEYVYHRLRDEGLDDVAMGVEGTWEGTDKARNELDVVAIHVNRLLVVECKTLRHGNEAADDQ
QLYKLDSIGDNLRGFFGTSWMVSARQPTDIMRERARQHRIRLIGPDELPRLRDIVREWKAHVEPC
>Mature_384_residues
TRLHIQLVSAQLAGNLIPALMERPEHAALIVTPAMAGQAQLLRKLEEEAGIAVQTFENAPDADLPQLHEFALGILEELPA
ADEVVLNLTGGNKLMALGFLEMLRDSVHRRIYTDTAHGRLEHLPEGNERAEAPTPQTSVLDVPISLRAQGFRYHRAASAD
EDWQREAGERKQVAKRLAEVARDHGDFLGALNAVASRSLDREGRLVARDQAFDDPPYGRWANNLGWLRDQGLLDWEGGAE
VTFLDEERTRFLNGGWLEEYVYHRLRDEGLDDVAMGVEGTWEGTDKARNELDVVAIHVNRLLVVECKTLRHGNEAADDQQ
LYKLDSIGDNLRGFFGTSWMVSARQPTDIMRERARQHRIRLIGPDELPRLRDIVREWKAHVEPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43397; Mature: 43266

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLHIQLVSAQLAGNLIPALMERPEHAALIVTPAMAGQAQLLRKLEEEAGIAVQTFENA
CCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEECCC
PDADLPQLHEFALGILEELPAADEVVLNLTGGNKLMALGFLEMLRDSVHRRIYTDTAHGR
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
LEHLPEGNERAEAPTPQTSVLDVPISLRAQGFRYHRAASADEDWQREAGERKQVAKRLAE
HHCCCCCCCCCCCCCCCCEEEECCHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHH
VARDHGDFLGALNAVASRSLDREGRLVARDQAFDDPPYGRWANNLGWLRDQGLLDWEGGA
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHCCCCCHHCCCCEECCCCC
EVTFLDEERTRFLNGGWLEEYVYHRLRDEGLDDVAMGVEGTWEGTDKARNELDVVAIHVN
EEEEECHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCCEEEEEEEEC
RLLVVECKTLRHGNEAADDQQLYKLDSIGDNLRGFFGTSWMVSARQPTDIMRERARQHRI
EEEEEEEHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCE
RLIGPDELPRLRDIVREWKAHVEPC
EEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRLHIQLVSAQLAGNLIPALMERPEHAALIVTPAMAGQAQLLRKLEEEAGIAVQTFENA
CEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEECCC
PDADLPQLHEFALGILEELPAADEVVLNLTGGNKLMALGFLEMLRDSVHRRIYTDTAHGR
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
LEHLPEGNERAEAPTPQTSVLDVPISLRAQGFRYHRAASADEDWQREAGERKQVAKRLAE
HHCCCCCCCCCCCCCCCCEEEECCHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHH
VARDHGDFLGALNAVASRSLDREGRLVARDQAFDDPPYGRWANNLGWLRDQGLLDWEGGA
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHCCCCCHHCCCCEECCCCC
EVTFLDEERTRFLNGGWLEEYVYHRLRDEGLDDVAMGVEGTWEGTDKARNELDVVAIHVN
EEEEECHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCCEEEEEEEEC
RLLVVECKTLRHGNEAADDQQLYKLDSIGDNLRGFFGTSWMVSARQPTDIMRERARQHRI
EEEEEEEHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCE
RLIGPDELPRLRDIVREWKAHVEPC
EEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA