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The map label for this gene is 121997419

Identifier: 121997419

GI number: 121997419

Start: 697188

End: 698150

Strand: Reverse

Name: 121997419

Synonym: Hhal_0619

Alternate gene names: NA

Gene position: 698150-697188 (Counterclockwise)

Preceding gene: 121997420

Following gene: 121997418

Centisome position: 26.07

GC content: 71.44

Gene sequence:

>963_bases
GTGGGCACCCTCTACATCGACCGGCGCCGGACGCGCCTGGAGCTCGCGCACAAGGCGCTCACCATTCGGGAACCGGAGGC
CCAGCCCCGCTCGGTGCCGCTGAGCCTCATCGACCGACTGATCGTCATTGGCCAGGTCGAGCTGAGCAGCGGCGTGCTCA
CTACTCTCGCCGAGAGCGGCGTCAGCCTGGTCTTCATGCCGAGCCGTGGACAGCGGCGCAGCGCCTTCCTCCGCAGCGAG
GGCCATGGCGATGCCGTCCGCCGCCTCGGCCAGTACAGGCTCATCCACCTCGAGGCTGAGCGCCAGGCCTGGGCGCGCCG
CCTCGTGCGACTGCGTCTGGCCGGGCAGCAGCGGCTCCTCGCGAGTGCGCTATACCGGCGTCCTGATCAACGCCAGCCGC
TCACGGCTGCCCACCGCGAGATCGAGGCGGCCCAGGCGACCGTGCGCCGCGAGGCGCCCGCCGGTGAGCAACTGCGGGGG
CAGGAGGGTACGGCCGCGGCGGCCTTCTTCCGCGGCTACGGCGCTCTCTTCGCCGAAGCGCTAGGCTTCTCCGGGCGAAA
TCGCCGGCCACCCCGGGATCCCGTCAACGCCGTCCTCTCGCTCGGCTACACCCTCGCGCACGGCGATGCACTGCGGGCCG
TCACCGCTGCCGGCCTCGATCCGGCCATCGGCGTACTGCACGAGCCTGCCTGGGGGCGAGACTCCTTGGCCTGCGATCTC
ACGGAGATCGCCCGGGCCCGGGTGGAGCGGCTGACCTGGGAGCTATTCGCGAGCGAGACGCTCCAGCGCACGGACTTCAC
CAACAGCACCGAGGGCGTACGACTAGGCAAGGCTGCACGGCAGACCTTCTTCGGCTGCTGGGAACGCCATGCCGGGCTCC
ATCGACGCTGGCAGCGCCGCGCCGCTCAGGCCCTAGCCGCCGAGTGCGCCCACCACGGCGCCCAAACTATTCCCGAGGCG
TAG

Upstream 100 bases:

>100_bases
GCCGGCGCCCGGCCACGCGCCGCAAGATTGCCGTGCCCGCCACGCTGGCGCCCCTGTGCCAATCTGATGTCCAAGCCTCC
AGCCAAAAGGGAGTAAGGAA

Downstream 100 bases:

>100_bases
CATGTGCACGGAGTTTGAGCTGCTGATCCGCAAGCAGGCCCGCGCCCAGGGGCGCTCCCTGTCCGAGGTCGCTCGCCGGG
CTGGAGTTAGTCGCCAGTGG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Protein Cas1 Family; CRISPR-Associated ; CRISPR-Associated HMARI/TNEAP Subtype; Cytoplasmic Protein; CRISPR-Associated Exonuclease Cas4/Cas1 Family Protein; DNA Polymerase; Cas1 Family CRISPR-Associated Protein; Crispr-; Crispr-Associated A; CRISPR-Associated DNA Polymerase

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGTLYIDRRRTRLELAHKALTIREPEAQPRSVPLSLIDRLIVIGQVELSSGVLTTLAESGVSLVFMPSRGQRRSAFLRSE
GHGDAVRRLGQYRLIHLEAERQAWARRLVRLRLAGQQRLLASALYRRPDQRQPLTAAHREIEAAQATVRREAPAGEQLRG
QEGTAAAAFFRGYGALFAEALGFSGRNRRPPRDPVNAVLSLGYTLAHGDALRAVTAAGLDPAIGVLHEPAWGRDSLACDL
TEIARARVERLTWELFASETLQRTDFTNSTEGVRLGKAARQTFFGCWERHAGLHRRWQRRAAQALAAECAHHGAQTIPEA

Sequences:

>Translated_320_residues
MGTLYIDRRRTRLELAHKALTIREPEAQPRSVPLSLIDRLIVIGQVELSSGVLTTLAESGVSLVFMPSRGQRRSAFLRSE
GHGDAVRRLGQYRLIHLEAERQAWARRLVRLRLAGQQRLLASALYRRPDQRQPLTAAHREIEAAQATVRREAPAGEQLRG
QEGTAAAAFFRGYGALFAEALGFSGRNRRPPRDPVNAVLSLGYTLAHGDALRAVTAAGLDPAIGVLHEPAWGRDSLACDL
TEIARARVERLTWELFASETLQRTDFTNSTEGVRLGKAARQTFFGCWERHAGLHRRWQRRAAQALAAECAHHGAQTIPEA
>Mature_319_residues
GTLYIDRRRTRLELAHKALTIREPEAQPRSVPLSLIDRLIVIGQVELSSGVLTTLAESGVSLVFMPSRGQRRSAFLRSEG
HGDAVRRLGQYRLIHLEAERQAWARRLVRLRLAGQQRLLASALYRRPDQRQPLTAAHREIEAAQATVRREAPAGEQLRGQ
EGTAAAAFFRGYGALFAEALGFSGRNRRPPRDPVNAVLSLGYTLAHGDALRAVTAAGLDPAIGVLHEPAWGRDSLACDLT
EIARARVERLTWELFASETLQRTDFTNSTEGVRLGKAARQTFFGCWERHAGLHRRWQRRAAQALAAECAHHGAQTIPEA

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35493; Mature: 35362

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLYIDRRRTRLELAHKALTIREPEAQPRSVPLSLIDRLIVIGQVELSSGVLTTLAESG
CCCEEECCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHCC
VSLVFMPSRGQRRSAFLRSEGHGDAVRRLGQYRLIHLEAERQAWARRLVRLRLAGQQRLL
CEEEEECCCCCHHHHHHHCCCCCHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
ASALYRRPDQRQPLTAAHREIEAAQATVRREAPAGEQLRGQEGTAAAAFFRGYGALFAEA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
LGFSGRNRRPPRDPVNAVLSLGYTLAHGDALRAVTAAGLDPAIGVLHEPAWGRDSLACDL
HCCCCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCH
TEIARARVERLTWELFASETLQRTDFTNSTEGVRLGKAARQTFFGCWERHAGLHRRWQRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQALAAECAHHGAQTIPEA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GTLYIDRRRTRLELAHKALTIREPEAQPRSVPLSLIDRLIVIGQVELSSGVLTTLAESG
CCEEECCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHCC
VSLVFMPSRGQRRSAFLRSEGHGDAVRRLGQYRLIHLEAERQAWARRLVRLRLAGQQRLL
CEEEEECCCCCHHHHHHHCCCCCHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
ASALYRRPDQRQPLTAAHREIEAAQATVRREAPAGEQLRGQEGTAAAAFFRGYGALFAEA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
LGFSGRNRRPPRDPVNAVLSLGYTLAHGDALRAVTAAGLDPAIGVLHEPAWGRDSLACDL
HCCCCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCH
TEIARARVERLTWELFASETLQRTDFTNSTEGVRLGKAARQTFFGCWERHAGLHRRWQRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQALAAECAHHGAQTIPEA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA