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The map label for this gene is 121997420

Identifier: 121997420

GI number: 121997420

Start: 698261

End: 698575

Strand: Reverse

Name: 121997420

Synonym: Hhal_0620

Alternate gene names: NA

Gene position: 698575-698261 (Counterclockwise)

Preceding gene: 121997421

Following gene: 121997419

Centisome position: 26.08

GC content: 67.3

Gene sequence:

>315_bases
ATGGGTGAGCGCGCCATCGATCACCTGGTCTGTTATGACATCCGCAAGCCGGCCCGCCTGCGCCGTGTCCATCGGCTGAT
GAAGGAATGGGGCGTGCCGCTGCAGTACAGCGTTTTCTACTGCCGCCTCGTCCCGAGCGCCCGGCATCAGCTCGCCGAGG
CTCTGCGCCGCGAGATCGACGAGCGCGTCGACGACGTGCGGATCTACGCCTTGCAGCCTCAAGGGGAGGGCACCTACCAG
GGTCCGGCGCCCCTGCCGCCAGGCCTGGTGTTGCCGGGGTTAAGCCTGAGACCGCAATTCCCGGAGGCCGACTAG

Upstream 100 bases:

>100_bases
CTCGCGCGCCCCGTGCCCAGCCAGCTTCATCGGCACCTGCAGGCGCTCACGGAGGAATACTACGTCAGCTGGCAGCGCAT
GCGCCGGGAGGAGCCCGCCC

Downstream 100 bases:

>100_bases
CGCCGTGGCAGCCGGCGCCCGGCCACGCGCCGCAAGATTGCCGTGCCCGCCACGCTGGCGCCCCTGTGCCAATCTGATGT
CCAAGCCTCCAGCCAAAAGG

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGERAIDHLVCYDIRKPARLRRVHRLMKEWGVPLQYSVFYCRLVPSARHQLAEALRREIDERVDDVRIYALQPQGEGTYQ
GPAPLPPGLVLPGLSLRPQFPEAD

Sequences:

>Translated_104_residues
MGERAIDHLVCYDIRKPARLRRVHRLMKEWGVPLQYSVFYCRLVPSARHQLAEALRREIDERVDDVRIYALQPQGEGTYQ
GPAPLPPGLVLPGLSLRPQFPEAD
>Mature_103_residues
GERAIDHLVCYDIRKPARLRRVHRLMKEWGVPLQYSVFYCRLVPSARHQLAEALRREIDERVDDVRIYALQPQGEGTYQG
PAPLPPGLVLPGLSLRPQFPEAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11960; Mature: 11829

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERAIDHLVCYDIRKPARLRRVHRLMKEWGVPLQYSVFYCRLVPSARHQLAEALRREID
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCHHHHHHHHHHHHHHH
ERVDDVRIYALQPQGEGTYQGPAPLPPGLVLPGLSLRPQFPEAD
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GERAIDHLVCYDIRKPARLRRVHRLMKEWGVPLQYSVFYCRLVPSARHQLAEALRREID
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCHHHHHHHHHHHHHHH
ERVDDVRIYALQPQGEGTYQGPAPLPPGLVLPGLSLRPQFPEAD
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA