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The map label for this gene is 121997417

Identifier: 121997417

GI number: 121997417

Start: 695606

End: 695926

Strand: Reverse

Name: 121997417

Synonym: Hhal_0617

Alternate gene names: NA

Gene position: 695926-695606 (Counterclockwise)

Preceding gene: 121997418

Following gene: 121997416

Centisome position: 25.98

GC content: 62.93

Gene sequence:

>321_bases
ATGCCCAGAACCCGACCGCCTTACACGCAGGCGTTTCGCCAGCAGATGATTGATCTTGTCCGCTCAGGGCGCACGCCTTC
GGAACTAGCTCAGGAGTTTGAGCCGACCGCTCAGACCATCACCAACGGGGTCGCCCAGGCAGACCGCGACGCTGGCAAGC
GCACGGACGGTCCGACCAGCGAGCAAAACGAGGAGCTCAAGCGGCTGCGAGCCGAGAATAAGCGGCTGCGCGAAGAGCGG
GAGATTCTGTCAAAAGCCGCGGCCTGGTTCGCTCGGGAGACCGACGCGAAGTCCAGCGGATCTTCGAGTTCGTCGAAGTG
A

Upstream 100 bases:

>100_bases
GCCACTGGTACGTCCGAACCTAGCCCTGTTGGAAAAGGGATTGTGGAGTTGATCCGCTTCCGTGGAGACCTTGATGCTTT
GGTAAAAGGAGGTTTCCACG

Downstream 100 bases:

>100_bases
ATCGGGCCTATTACAGCACTGCCACGCTTTGCGGGGTACTGGGCGTCTCCCCCAGCGGTTTCTACGCGTGGCGCAATCGC
GGCCGCTCAGTCCGTGCGGC

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: Integrase Catalytic Region

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPRTRPPYTQAFRQQMIDLVRSGRTPSELAQEFEPTAQTITNGVAQADRDAGKRTDGPTSEQNEELKRLRAENKRLREER
EILSKAAAWFARETDAKSSGSSSSSK

Sequences:

>Translated_106_residues
MPRTRPPYTQAFRQQMIDLVRSGRTPSELAQEFEPTAQTITNGVAQADRDAGKRTDGPTSEQNEELKRLRAENKRLREER
EILSKAAAWFARETDAKSSGSSSSSK
>Mature_105_residues
PRTRPPYTQAFRQQMIDLVRSGRTPSELAQEFEPTAQTITNGVAQADRDAGKRTDGPTSEQNEELKRLRAENKRLREERE
ILSKAAAWFARETDAKSSGSSSSSK

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11911; Mature: 11780

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTRPPYTQAFRQQMIDLVRSGRTPSELAQEFEPTAQTITNGVAQADRDAGKRTDGPTS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
EQNEELKRLRAENKRLREEREILSKAAAWFARETDAKSSGSSSSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRTRPPYTQAFRQQMIDLVRSGRTPSELAQEFEPTAQTITNGVAQADRDAGKRTDGPTS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
EQNEELKRLRAENKRLREEREILSKAAAWFARETDAKSSGSSSSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA