| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997393
Identifier: 121997393
GI number: 121997393
Start: 667283
End: 667639
Strand: Reverse
Name: 121997393
Synonym: Hhal_0592
Alternate gene names: NA
Gene position: 667639-667283 (Counterclockwise)
Preceding gene: 121997394
Following gene: 121997392
Centisome position: 24.93
GC content: 68.07
Gene sequence:
>357_bases ATGGAGTGCCGGATCGGCGTGCGGAGAGCCCGGCTACATCGAGTTGAAGCGCAGGAGGTAGTGATGTCTGCAGTTGGAGG AGTTGGCGGAGGTGCGCCGAGCATGCCGCCGCCGTCCCAGGGCGCGGGCGGTGACGACCCCTTCGAGGGGGAGGAGATGG AGAGCGCAGGCGGTTCCGAGTTCGGCGGTGATGCCGCAGGCGGGGCCGACACGGTAGACATCTCCTCGATCGCCGGCGGC GAGGACGTCGGCACCAGCACCGAGTCCCTTGAGGACGACGGTGGCGCTGCCAGCTACGACGCCTCGGGTGGCGTCGAAGA TCTGGACGCTGGCGGTGAAATCGACGCCATGGTCTGA
Upstream 100 bases:
>100_bases TGCAGGTCCTACTCGTAACCGGCAACGCCCTGCGCCTCGGCGCGCAGCCTGCCGTGGAAGGGGTAGGGCGGAGACCGGAA CCGAACAGCCGCAACCGGCA
Downstream 100 bases:
>100_bases CCTTCCCCGGGGGGCAGCGGCTCACGGGCCGTTGCCCCGTCCGTTATAATCCCCGCCCTCAGCCGCCGTTCAGCGCGGCA CACTTGTCCCAGCCAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV
Sequences:
>Translated_118_residues MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV >Mature_118_residues MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11491; Mature: 11491
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC FGGDAAGGADTVDISSIAGGEDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC FGGDAAGGADTVDISSIAGGEDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA