| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is engA
Identifier: 121997392
GI number: 121997392
Start: 665753
End: 667171
Strand: Reverse
Name: engA
Synonym: Hhal_0591
Alternate gene names: 121997392
Gene position: 667171-665753 (Counterclockwise)
Preceding gene: 121997393
Following gene: 121997390
Centisome position: 24.91
GC content: 69.77
Gene sequence:
>1419_bases ATGTCTGCGGTAATCGCCCTGGTCGGGCGGCCGAATGTCGGCAAATCGACCCTGTTCAACCGGCTCACCGGCAGCCGCGA CGCCCTCGTGGCGGATCACCCGGGCCTGACTCGGGACCGTCAGTATGGGATCGTGCGCCACCAGGGGGGCCACGCCGTGG TGGTGGATACCGGAGGCATGGGGGAAGAACTCGAGGGGGTCGGCGGCTGCATGCACGAGCAGGCCCGGGCCGCCATCGCC GGTGCCGATGCGGTCGTCTTCCTGGTCGACGGGCAGGCCGGGGCCACCGTCGGTGACGAGGAGATCGCCGCTGAGCTGCG GCGAGCCCAGGTGCCGGTGTTCCTGGCGGTCAACAAGACCGACGGGCTCGACGCCGGGGTGGCGGCCGCCGATTTCCACG GTCTGGGCCTGCAGCCGGTTCACGCCATCGCCGCGACGCGCGGTCGTGGGGTGGGCGAGCTGCTGGACGCCGTCTTCGCG CTCCTGCCTCCCGCTGAGCCGGATGCGGTGGGCTCCGATGGCCCAGGCGGGATTCCGGTGGCGATGATCGGCCGGCCCAA CGTCGGCAAATCCACGCTGGTCAATCGCCTCCTCGGCGAGGAGCGGGTGGTGGTCTACGACGAGCCGGGCACCACCCGCG ACAGTATTGCCGTGCCGTTCGAGCGCGACGGGCAGCACTACACCCTCATCGACACCGCCGGGGTGCGGCGTCGCGCGCGG GTTCAGGAGACGGTCGAGAAGTTCAGCGTGGTCAAGACCCTCGAGGCCATCGAGCGGGCCTCGGTGGTGATGCTGGTGAC CGATGCCCAGGAAGGGATCACCGAGCAGGACGCGCACTTGGCCGGGCACGTCCTGCAGGCCGGGCGGGCGCTGGTATTGG TCATCAACAAGTGGGACGGCCTGGATCCCGATCAGCGCCGCAAGGTACGGCGGGATCTGGATCTGCGCTTCGCCTTCCTC GGTTTCGCCCGCCACCACTTCGTTTCGGCCCTGCACGGCAGTGGCGTCGGCCTGCTGCTCGAATCGGTGGAGCGCGCCCA CGCCGCGGCACACCGGGATCTGGCCACGCCGGAACTCAACGACGCCCTGCAGGAGGCGCTGGCCAACCATCAGCCGCCGC TCTCGCGGGGGCGGCGGATCAAGCTGCGCTACGCCCACCAGGGCGGCCACAACCCGCCGGTGATCGTGATCCACGGCAAC CAGGTGCAGCGGCTGCCGCGGGCCTATATGCGCTACCTGGAGAACTTCTTCCGCGACACCTTTGACCTCTACGGGACGCC GGTGCGCATCGAGTGCCGGGCCAGCGATAACCCCTTTGCCGACAAGCCCAACCAGCTTACCGAGCGCCAGCGCCGGCGGC GCCAGCGGGTGATTCACCACGCCAAGAAGCGCGAGAAGAAGCGCAAGCGCCGCCGCTAG
Upstream 100 bases:
>100_bases GGGCAGCGGCTCACGGGCCGTTGCCCCGTCCGTTATAATCCCCGCCCTCAGCCGCCGTTCAGCGCGGCACACTTGTCCCA GCCAATGCGGGGAATGCCCA
Downstream 100 bases:
>100_bases ACGGTCGGCGGGCTAGGTGCGGACCAGCACCACGGAGACGTTGTCCGGTCCGCCGGCATCCAGGGTGGCTTCGATCAGGT CCTGGGCGCGCTGGTTCAGT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGMGEELEGVGGCMHEQARAAIA GADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAVNKTDGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFA LLPPAEPDAVGSDGPGGIPVAMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDTAGVRRRAR VQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDGLDPDQRRKVRRDLDLRFAFL GFARHHFVSALHGSGVGLLLESVERAHAAAHRDLATPELNDALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGN QVQRLPRAYMRYLENFFRDTFDLYGTPVRIECRASDNPFADKPNQLTERQRRRRQRVIHHAKKREKKRKRRR
Sequences:
>Translated_472_residues MSAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGMGEELEGVGGCMHEQARAAIA GADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAVNKTDGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFA LLPPAEPDAVGSDGPGGIPVAMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDTAGVRRRAR VQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDGLDPDQRRKVRRDLDLRFAFL GFARHHFVSALHGSGVGLLLESVERAHAAAHRDLATPELNDALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGN QVQRLPRAYMRYLENFFRDTFDLYGTPVRIECRASDNPFADKPNQLTERQRRRRQRVIHHAKKREKKRKRRR >Mature_471_residues SAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGMGEELEGVGGCMHEQARAAIAG ADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAVNKTDGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFAL LPPAEPDAVGSDGPGGIPVAMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDTAGVRRRARV QETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDGLDPDQRRKVRRDLDLRFAFLG FARHHFVSALHGSGVGLLLESVERAHAAAHRDLATPELNDALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGNQ VQRLPRAYMRYLENFFRDTFDLYGTPVRIECRASDNPFADKPNQLTERQRRRRQRVIHHAKKREKKRKRRR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Homo sapiens, GI193082991, Length=189, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI193082988, Length=189, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI87082120, Length=492, Percent_Identity=53.4552845528455, Blast_Score=516, Evalue=1e-148, Organism=Escherichia coli, GI1788919, Length=120, Percent_Identity=40, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI2367268, Length=92, Percent_Identity=39.1304347826087, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=224, Percent_Identity=25.8928571428571, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_HALHL (A1WUL5)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001002179.1 - ProteinModelPortal: A1WUL5 - SMR: A1WUL5 - STRING: A1WUL5 - GeneID: 4710565 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_0591 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: A1WUL5 - ProtClustDB: PRK00093 - BioCyc: HHAL349124:HHAL_0591-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 51578; Mature: 51447
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGM CCCEEEEECCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEECCCC GEELEGVGGCMHEQARAAIAGADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAVNKT CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECC DGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFALLPPAEPDAVGSDGPGGIPV CCCCCCCCHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE AMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDTAGVRRRAR EEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCEEEEEECCCHHHHHH VQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDG HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC LDPDQRRKVRRDLDLRFAFLGFARHHFVSALHGSGVGLLLESVERAHAAAHRDLATPELN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH DALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGNQVQRLPRAYMRYLENFFRDT HHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH FDLYGTPVRIECRASDNPFADKPNQLTERQRRRRQRVIHHAKKREKKRKRRR HHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGM CCEEEEECCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEECCCC GEELEGVGGCMHEQARAAIAGADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAVNKT CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECC DGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFALLPPAEPDAVGSDGPGGIPV CCCCCCCCHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE AMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDTAGVRRRAR EEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCEEEEEECCCHHHHHH VQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDG HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC LDPDQRRKVRRDLDLRFAFLGFARHHFVSALHGSGVGLLLESVERAHAAAHRDLATPELN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH DALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGNQVQRLPRAYMRYLENFFRDT HHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH FDLYGTPVRIECRASDNPFADKPNQLTERQRRRRQRVIHHAKKREKKRKRRR HHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA