Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997393

Identifier: 121997393

GI number: 121997393

Start: 667283

End: 667639

Strand: Reverse

Name: 121997393

Synonym: Hhal_0592

Alternate gene names: NA

Gene position: 667639-667283 (Counterclockwise)

Preceding gene: 121997394

Following gene: 121997392

Centisome position: 24.93

GC content: 68.07

Gene sequence:

>357_bases
ATGGAGTGCCGGATCGGCGTGCGGAGAGCCCGGCTACATCGAGTTGAAGCGCAGGAGGTAGTGATGTCTGCAGTTGGAGG
AGTTGGCGGAGGTGCGCCGAGCATGCCGCCGCCGTCCCAGGGCGCGGGCGGTGACGACCCCTTCGAGGGGGAGGAGATGG
AGAGCGCAGGCGGTTCCGAGTTCGGCGGTGATGCCGCAGGCGGGGCCGACACGGTAGACATCTCCTCGATCGCCGGCGGC
GAGGACGTCGGCACCAGCACCGAGTCCCTTGAGGACGACGGTGGCGCTGCCAGCTACGACGCCTCGGGTGGCGTCGAAGA
TCTGGACGCTGGCGGTGAAATCGACGCCATGGTCTGA

Upstream 100 bases:

>100_bases
TGCAGGTCCTACTCGTAACCGGCAACGCCCTGCGCCTCGGCGCGCAGCCTGCCGTGGAAGGGGTAGGGCGGAGACCGGAA
CCGAACAGCCGCAACCGGCA

Downstream 100 bases:

>100_bases
CCTTCCCCGGGGGGCAGCGGCTCACGGGCCGTTGCCCCGTCCGTTATAATCCCCGCCCTCAGCCGCCGTTCAGCGCGGCA
CACTTGTCCCAGCCAATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG
EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV

Sequences:

>Translated_118_residues
MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG
EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV
>Mature_118_residues
MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSEFGGDAAGGADTVDISSIAGG
EDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11491; Mature: 11491

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
FGGDAAGGADTVDISSIAGGEDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MECRIGVRRARLHRVEAQEVVMSAVGGVGGGAPSMPPPSQGAGGDDPFEGEEMESAGGSE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
FGGDAAGGADTVDISSIAGGEDVGTSTESLEDDGGAASYDASGGVEDLDAGGEIDAMV
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA