| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611851
Identifier: 121611851
GI number: 121611851
Start: 5478721
End: 5479803
Strand: Direct
Name: 121611851
Synonym: Veis_4953
Alternate gene names: NA
Gene position: 5478721-5479803 (Clockwise)
Preceding gene: 121611850
Following gene: 121611852
Centisome position: 98.42
GC content: 69.53
Gene sequence:
>1083_bases GTGTGGCAAGCGGCTTATCATCATGAATTGTCCATACCACAAACACAAGACATGCAATTTCCCGCATCGCCCGCATCGCC CGCATCGCCCGCATCGCCCGCATCGCCCGCATCGCCCGCATCGCCCGCCGCGACCGTTTCGACCGTTGCGCCTCCCCCGG TTCATGCACCTGCGGACGCGCGCTTCTTCCACTACGCGGGCGCCCGCGCCCCCGAGCGCCAGCGCCGCATCGACGCCAAC GGTGTGGGCTTGGCCGTCTACGAATGGGGCGCCGCCGACGCGCCGCCCGTGCTGCTGGTGCACGGAGCGCTCGACTTCGC GCGCACCTTCGACGTATTCGCGCCGCTGATTGCCGATGCCGGCTTTCGCGTCGTGTCCTACGACCAGCGCGGCCATGGCG ATTCGGCCCACGCCGCGCTGTACGGCTGGGTCGCCGACGAACGCGATCTACTGGCCGTGGCCGACGCCGTCACGCGCGCG CCCATCCCGGCCATCGGCCACAGCAAGGGCGGCTCGCTGCTGATCCATGCCATCGAGGCGCTGCCGCACCGCTTCACGCG TTTCGCCTGCATCGACGGCATGCCGTTCCGCAGCCCGCACCCGGACACGGCCATGCACGAGAAGCGCTACATGTCGCCCG AGATCATCAGCAACTGGCTGAACCACCGGCACACGGCCGCGTCGGCCCAACGCAAGCCCTCGCCGCTGCAGGACATCGCG CGCCGCCGCGCCCGGTTGAACCCGCGGCTCAGCCACGACTGGCTGTGCTACCTGGTCACGCAGGGCGCGCAGCACGACGC CGACGGCTGGCGCTGGAAGCTGGACCCGGCCATCCGCCCCGGCGGCTTCGGCCCCATGCGCTCGCGCTGGATGACCGACC GCCTGCCCGGCTTCCCGGTGCCGCTGCTGGCACTGTTCAGCACCATCGCCGAGCCTATGGGTTGGGACTGCACTTACGAA GACCTCGTCCCGTACCTTCCCCCCTCTGCACGCGGCCTGGCCATGGCCGACACCGGCCACTTCATCCACATCGAGCGCCC GCGTGAAACCGCCGACCTCGTCATCGATTTCCTGCGCACATGA
Upstream 100 bases:
>100_bases CGGTTGCAATGCTGCTGCCATTGGCATACTACAAACACTTATGGCTGTACCATATAACCTAGTCAATGGAAAATTATGCA GATATACTTTGGGTGACAGC
Downstream 100 bases:
>100_bases CCGAATTCCTCCCCCACGGCCGCATCCGCCTGGCGCTGCACCGCCTGCAGCCCGCACGCGCGCCCGGCGCCCACCCTTTG CTGCTGCTGCACGCCCTGGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Epoxide Hydrolase EphA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MWQAAYHHELSIPQTQDMQFPASPASPASPASPASPASPASPAATVSTVAPPPVHAPADARFFHYAGARAPERQRRIDAN GVGLAVYEWGAADAPPVLLVHGALDFARTFDVFAPLIADAGFRVVSYDQRGHGDSAHAALYGWVADERDLLAVADAVTRA PIPAIGHSKGGSLLIHAIEALPHRFTRFACIDGMPFRSPHPDTAMHEKRYMSPEIISNWLNHRHTAASAQRKPSPLQDIA RRRARLNPRLSHDWLCYLVTQGAQHDADGWRWKLDPAIRPGGFGPMRSRWMTDRLPGFPVPLLALFSTIAEPMGWDCTYE DLVPYLPPSARGLAMADTGHFIHIERPRETADLVIDFLRT
Sequences:
>Translated_360_residues MWQAAYHHELSIPQTQDMQFPASPASPASPASPASPASPASPAATVSTVAPPPVHAPADARFFHYAGARAPERQRRIDAN GVGLAVYEWGAADAPPVLLVHGALDFARTFDVFAPLIADAGFRVVSYDQRGHGDSAHAALYGWVADERDLLAVADAVTRA PIPAIGHSKGGSLLIHAIEALPHRFTRFACIDGMPFRSPHPDTAMHEKRYMSPEIISNWLNHRHTAASAQRKPSPLQDIA RRRARLNPRLSHDWLCYLVTQGAQHDADGWRWKLDPAIRPGGFGPMRSRWMTDRLPGFPVPLLALFSTIAEPMGWDCTYE DLVPYLPPSARGLAMADTGHFIHIERPRETADLVIDFLRT >Mature_360_residues MWQAAYHHELSIPQTQDMQFPASPASPASPASPASPASPASPAATVSTVAPPPVHAPADARFFHYAGARAPERQRRIDAN GVGLAVYEWGAADAPPVLLVHGALDFARTFDVFAPLIADAGFRVVSYDQRGHGDSAHAALYGWVADERDLLAVADAVTRA PIPAIGHSKGGSLLIHAIEALPHRFTRFACIDGMPFRSPHPDTAMHEKRYMSPEIISNWLNHRHTAASAQRKPSPLQDIA RRRARLNPRLSHDWLCYLVTQGAQHDADGWRWKLDPAIRPGGFGPMRSRWMTDRLPGFPVPLLALFSTIAEPMGWDCTYE DLVPYLPPSARGLAMADTGHFIHIERPRETADLVIDFLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39514; Mature: 39514
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAAYHHELSIPQTQDMQFPASPASPASPASPASPASPASPAATVSTVAPPPVHAPADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC RFFHYAGARAPERQRRIDANGVGLAVYEWGAADAPPVLLVHGALDFARTFDVFAPLIADA CEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCC GFRVVSYDQRGHGDSAHAALYGWVADERDLLAVADAVTRAPIPAIGHSKGGSLLIHAIEA CCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LPHRFTRFACIDGMPFRSPHPDTAMHEKRYMSPEIISNWLNHRHTAASAQRKPSPLQDIA HHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH RRRARLNPRLSHDWLCYLVTQGAQHDADGWRWKLDPAIRPGGFGPMRSRWMTDRLPGFPV HHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCH PLLALFSTIAEPMGWDCTYEDLVPYLPPSARGLAMADTGHFIHIERPRETADLVIDFLRT HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MWQAAYHHELSIPQTQDMQFPASPASPASPASPASPASPASPAATVSTVAPPPVHAPADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC RFFHYAGARAPERQRRIDANGVGLAVYEWGAADAPPVLLVHGALDFARTFDVFAPLIADA CEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCC GFRVVSYDQRGHGDSAHAALYGWVADERDLLAVADAVTRAPIPAIGHSKGGSLLIHAIEA CCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LPHRFTRFACIDGMPFRSPHPDTAMHEKRYMSPEIISNWLNHRHTAASAQRKPSPLQDIA HHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH RRRARLNPRLSHDWLCYLVTQGAQHDADGWRWKLDPAIRPGGFGPMRSRWMTDRLPGFPV HHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCH PLLALFSTIAEPMGWDCTYEDLVPYLPPSARGLAMADTGHFIHIERPRETADLVIDFLRT HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA