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The map label for this gene is uvrD [C]

Identifier: 121611842

GI number: 121611842

Start: 5464910

End: 5465857

Strand: Direct

Name: uvrD [C]

Synonym: Veis_4944

Alternate gene names: 121611842

Gene position: 5464910-5465857 (Clockwise)

Preceding gene: 121611838

Following gene: 121611843

Centisome position: 98.17

GC content: 66.67

Gene sequence:

>948_bases
ATGCAATCGACCTGCCGCCGCACATCCGCCTGGCGTCGCACGATGACCGTGGCCCCGGTCGCTCTGGTTCTGTCGCTCGC
GGTGCTGCACCCGGATTGCGCCGACGATGCCCTGGAGCGCGAGCACCTTGCAGCGCTGGTGCGCCAGATCGAACTGGCCG
ACCGCTTGGCAAACCAGTTGGCCGACCAGACCGCGCCCTACGACGCGCCGCGCGATGCGGGGCTGGCTCAGGTAGACAGC
GGCAGCGGCTGCCTGAGCCATTCGCAGACGCGCATGCTGCACGGCCAGACCCGCTACGGCGTCATGAGCCGTTTCTTCGA
CGAACTGCCCGAAAGCGCGCTCAAGTGGCTCACGCCGAAGAACCAGGGCTTCACGCCGTCGGCGTTCGGCTACGGCAGCG
GCTACGCGAGCACGCGCGGCGGCAGCGGTGGGTATGGTGGGGGCGGCAACAGCTACGGCGGCAGCAAGGACATCTTCGCC
AGCCCGCCAATGCCGCCGCAGAAGGCCGCGCCCTCGCACGGTCTGCGCTCGGGCATGCAGGTGTTCCACAACAAGTTCGA
CGAGGGCATGGTGCTGGCCCCCGAAGGCACCGGCGACGATGCGCGGGCGCAGGTCAGGTTCGCCCGCCACGGCGTGAAGT
GGCTGGTGCTAAGTGGCTGGCGCTGTCGGTGGCCAAGCCCACGCCGGTTTGAAATTGCTGCCAAACCTATAGCTAACGGC
ATAGGGCGGGCGCCGCGGCGGGATCAGCCGGGATCAGCCGTACACTCCGGACTCACCAAAGCATGGGGGATCAGGAATGT
GGTTCATGGGCATGATTGCCGGCCTGTTCATTGGGGCGCTGTTCAAATCAATGCCGGTGGCGCTGATTCTCGCACTCGTC
GGCGCGTACGCATTCTCGCAGATGTTCGGCAAGAAGAAAAAGGACGCGCCGCAGCGCACCGAGGCTGA

Upstream 100 bases:

>100_bases
CCGGTAGCCCTCGGATGCCCATTCCCTGCGGCGCTGGCCGAGTGCCCGCCGGAGCATCGACACCATTCGCCTTGCCGAGG
CTTCAACGAGGAATGGCACG

Downstream 100 bases:

>100_bases
AAGCGCGCTGTCGGACGACCAAGCCGTTGGTGCACCGGCGGCAGCGGGAGCGCCCGCAGGCGGTGTGCTGAAGCTACAGC
AGCGGGTGAGCGAACTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase UvrD; Uvrd/Rep Helicase

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQSTCRRTSAWRRTMTVAPVALVLSLAVLHPDCADDALEREHLAALVRQIELADRLANQLADQTAPYDAPRDAGLAQVDS
GSGCLSHSQTRMLHGQTRYGVMSRFFDELPESALKWLTPKNQGFTPSAFGYGSGYASTRGGSGGYGGGGNSYGGSKDIFA
SPPMPPQKAAPSHGLRSGMQVFHNKFDEGMVLAPEGTGDDARAQVRFARHGVKWLVLSGWRCRWPSPRRFEIAAKPIANG
IGRAPRRDQPGSAVHSGLTKAWGIRNVVHGHDCRPVHWGAVQINAGGADSRTRRRVRILADVRQEEKGRAAAHRG

Sequences:

>Translated_315_residues
MQSTCRRTSAWRRTMTVAPVALVLSLAVLHPDCADDALEREHLAALVRQIELADRLANQLADQTAPYDAPRDAGLAQVDS
GSGCLSHSQTRMLHGQTRYGVMSRFFDELPESALKWLTPKNQGFTPSAFGYGSGYASTRGGSGGYGGGGNSYGGSKDIFA
SPPMPPQKAAPSHGLRSGMQVFHNKFDEGMVLAPEGTGDDARAQVRFARHGVKWLVLSGWRCRWPSPRRFEIAAKPIANG
IGRAPRRDQPGSAVHSGLTKAWGIRNVVHGHDCRPVHWGAVQINAGGADSRTRRRVRILADVRQEEKGRAAAHRG
>Mature_315_residues
MQSTCRRTSAWRRTMTVAPVALVLSLAVLHPDCADDALEREHLAALVRQIELADRLANQLADQTAPYDAPRDAGLAQVDS
GSGCLSHSQTRMLHGQTRYGVMSRFFDELPESALKWLTPKNQGFTPSAFGYGSGYASTRGGSGGYGGGGNSYGGSKDIFA
SPPMPPQKAAPSHGLRSGMQVFHNKFDEGMVLAPEGTGDDARAQVRFARHGVKWLVLSGWRCRWPSPRRFEIAAKPIANG
IGRAPRRDQPGSAVHSGLTKAWGIRNVVHGHDCRPVHWGAVQINAGGADSRTRRRVRILADVRQEEKGRAAAHRG

Specific function: Has Both Atpase And Helicase Activities. Unwinds DNA Duplexes With 3' To 5' Polarity With Respect To The Bound Strand And Initiates Unwinding Most Effectively When A Single-Stranded Region Is Present. Involved In The Post-Incision Events Of Nucleotide Exc

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3000 [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 34106; Mature: 34106

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTCRRTSAWRRTMTVAPVALVLSLAVLHPDCADDALEREHLAALVRQIELADRLANQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQTAPYDAPRDAGLAQVDSGSGCLSHSQTRMLHGQTRYGVMSRFFDELPESALKWLTPK
HHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
NQGFTPSAFGYGSGYASTRGGSGGYGGGGNSYGGSKDIFASPPMPPQKAAPSHGLRSGMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VFHNKFDEGMVLAPEGTGDDARAQVRFARHGVKWLVLSGWRCRWPSPRRFEIAAKPIANG
HHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHH
IGRAPRRDQPGSAVHSGLTKAWGIRNVVHGHDCRPVHWGAVQINAGGADSRTRRRVRILA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCHHHHHHHHHHH
DVRQEEKGRAAAHRG
HHHHHHHCCHHCCCC
>Mature Secondary Structure
MQSTCRRTSAWRRTMTVAPVALVLSLAVLHPDCADDALEREHLAALVRQIELADRLANQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQTAPYDAPRDAGLAQVDSGSGCLSHSQTRMLHGQTRYGVMSRFFDELPESALKWLTPK
HHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
NQGFTPSAFGYGSGYASTRGGSGGYGGGGNSYGGSKDIFASPPMPPQKAAPSHGLRSGMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VFHNKFDEGMVLAPEGTGDDARAQVRFARHGVKWLVLSGWRCRWPSPRRFEIAAKPIANG
HHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHH
IGRAPRRDQPGSAVHSGLTKAWGIRNVVHGHDCRPVHWGAVQINAGGADSRTRRRVRILA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCHHHHHHHHHHH
DVRQEEKGRAAAHRG
HHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA