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The map label for this gene is capD [H]

Identifier: 121611763

GI number: 121611763

Start: 5375750

End: 5377552

Strand: Direct

Name: capD [H]

Synonym: Veis_4862

Alternate gene names: 121611763

Gene position: 5375750-5377552 (Clockwise)

Preceding gene: 121611762

Following gene: 121611764

Centisome position: 96.57

GC content: 67.33

Gene sequence:

>1803_bases
ATGCACTTCTTGCGCTCCCCCTTGGTGCTCTTTGTCGCCGACCTGGCGCTGGCGCTGCTGGCCTGGTGGCTGGCCTTCTG
GCTGCGTTTCAACCTGGACATTCCGGAGGAATTCGTCCAACTGGCCCTGGCGAGCAGCCCATGGTGTGTGCTGGCCTACG
GGGTCGGCTTCGCGTTCGCCCGGATCGACCGCCAGGTCTGGAGCTATATCGGCCTGCCCGAGCTACGCCAACTGGCCATC
GGCATCGTCCTGAGCGGCACGCTGACTGCGGCGGGGGTGCTGATGCTCAGGCTGCACGCTTTCCCGCGCTCGACCCTGCT
GTTGCAGCCGCTGCTGGCCTTGGTGCTGATGGGCGCTGCCCGGGCGGGCTGGCGCACGTTCGCCGAGCGGCGCCTGGTGG
CCCGGCAGGGCAAGCCGGTGCTGATCCTGGGCACTTTGCCGCAGGCTTCGGACGCGCTGCGGGCGCTCAAGGGGTCCTCG
CAATGGCAGCCGGTGGGCATTTTGTCGCCGCAACCCGACGAGGTGGGCCGCTCGCTGCAGAGCGTGCGGGTCTGGGGCAC
GCCGGCCGAGACCGCGCGCGTGGCGCAGACGCTGGCCGTGCGGGCCTTGCTGGTGGCCAGCCCGCCGGGCGCATCGGGCC
GGCGCGAGATGCTGCTGCAAGCCGCAGATACCGGCGTGGCGCTGCTGACCTTGCCACGGCCGGACGAATGGCTCAAGAGC
GACGGCGCGGGGCCGCGCAGGCTGGAATTGGAGGATCTGCTCGGCCGCGAGTCGGTGCAGTTGGATGTGGCCAGCCTGTC
GGGCCTGCTGTCGGGGCAAACCGTGCTGGTGACAGGCGCGGGGGGCTCGATCGGCGCGCAGTTGTGCCGCCAGATCGCGC
GTTTCGGTGTCCGGCGGCTGGTGTGCGTCGACATTTGCGAATTTGCCGTCTACCAGTTGGAGCAGGAACTGCGCGAAGCC
CACCCGCAGATGCAAGGCTGCTACTACACCGCGAATGTGCGCGAGCCGGCGCGCCTGCTGGCCATCGCGGACAAGCACCG
CCCGGCCGTGGTCTTTCACGCCGCTGCGTACAAGCATGTGCCGTTGATGGAGGAGCTCAACGCGATCGAGGCCCTGCGCA
CCAACGTGGCCGGCTCCTGGCATGCGGCGCGCGCGGCCGGTGTTTGCGGGGCCGGGCGTTTCGTGATGATCTCCACCGAC
AAGGCCGTCAACCCGACCAACGTGATGGGCGCCAGCAAGCGGCTGGCCGAGTTGATGGTGCAAAGTGCCGCGCAGGCGTT
CGCCGGCACCCATTACGTCTCGGTGCGCTTTGGCAATGTGCTGGGTTCGAGCGGCTCGGTGGTGCCGCTGTTCACCAGGC
AGATTGCCACCGGTGGCCCGGTCACCGTGACGCATCCGGACATCGTGCGCTACTTCATGACCATTGCGGAAGCGGCGCAG
TTGGTGCTGCAAGCCGGGTTGATGGGCCGCTCGGGCCAGATCTTCGTGATGGACATGGGCGAGCCGGTGAAGATCATCGA
ACTGGCCCGCATGATGATTCGTCTGTCCGGCAAGACCGAACTGGAGATTCCGATCAGCTACACCGGCCTGAGGCCCGGTG
AAAAATTGTTCGAGGAATTGCTGGCCAACGACGAATCCAGCGTGGCCACGCCGCATCCCAAACTGAGAATCGCCAAGACC
TCCCGGCAGGGGCTGCCGGATGTGGCGTCGGTGTTGCAATGGATCGGGGATGCCGATGCTGAACCAGAGGAGGCGATACG
GGCCTGGCTCCGGACGCTGGTGCCGGAGTATCTGGTGCGCTGA

Upstream 100 bases:

>100_bases
AGTCGGTCGGGACAACATCTGGGGCTGCCAGTTTCATCCGGAGCGCAGCGCCGAGCACGGCCTTGGCGTGTTGCGCTCTT
TCCTGGCTCTGTGACGGCGT

Downstream 100 bases:

>100_bases
GCCTGAAAACCGCAGTGCCGGCCACCCGCAGCGCCAGGGCCGGCGCGGCCTGGGGGGAAGGCGCCGAACTGGCCATTCAC
CGGGGCTCGATCGGCGAACG

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MHFLRSPLVLFVADLALALLAWWLAFWLRFNLDIPEEFVQLALASSPWCVLAYGVGFAFARIDRQVWSYIGLPELRQLAI
GIVLSGTLTAAGVLMLRLHAFPRSTLLLQPLLALVLMGAARAGWRTFAERRLVARQGKPVLILGTLPQASDALRALKGSS
QWQPVGILSPQPDEVGRSLQSVRVWGTPAETARVAQTLAVRALLVASPPGASGRREMLLQAADTGVALLTLPRPDEWLKS
DGAGPRRLELEDLLGRESVQLDVASLSGLLSGQTVLVTGAGGSIGAQLCRQIARFGVRRLVCVDICEFAVYQLEQELREA
HPQMQGCYYTANVREPARLLAIADKHRPAVVFHAAAYKHVPLMEELNAIEALRTNVAGSWHAARAAGVCGAGRFVMISTD
KAVNPTNVMGASKRLAELMVQSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPDIVRYFMTIAEAAQ
LVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISYTGLRPGEKLFEELLANDESSVATPHPKLRIAKT
SRQGLPDVASVLQWIGDADAEPEEAIRAWLRTLVPEYLVR

Sequences:

>Translated_600_residues
MHFLRSPLVLFVADLALALLAWWLAFWLRFNLDIPEEFVQLALASSPWCVLAYGVGFAFARIDRQVWSYIGLPELRQLAI
GIVLSGTLTAAGVLMLRLHAFPRSTLLLQPLLALVLMGAARAGWRTFAERRLVARQGKPVLILGTLPQASDALRALKGSS
QWQPVGILSPQPDEVGRSLQSVRVWGTPAETARVAQTLAVRALLVASPPGASGRREMLLQAADTGVALLTLPRPDEWLKS
DGAGPRRLELEDLLGRESVQLDVASLSGLLSGQTVLVTGAGGSIGAQLCRQIARFGVRRLVCVDICEFAVYQLEQELREA
HPQMQGCYYTANVREPARLLAIADKHRPAVVFHAAAYKHVPLMEELNAIEALRTNVAGSWHAARAAGVCGAGRFVMISTD
KAVNPTNVMGASKRLAELMVQSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPDIVRYFMTIAEAAQ
LVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISYTGLRPGEKLFEELLANDESSVATPHPKLRIAKT
SRQGLPDVASVLQWIGDADAEPEEAIRAWLRTLVPEYLVR
>Mature_600_residues
MHFLRSPLVLFVADLALALLAWWLAFWLRFNLDIPEEFVQLALASSPWCVLAYGVGFAFARIDRQVWSYIGLPELRQLAI
GIVLSGTLTAAGVLMLRLHAFPRSTLLLQPLLALVLMGAARAGWRTFAERRLVARQGKPVLILGTLPQASDALRALKGSS
QWQPVGILSPQPDEVGRSLQSVRVWGTPAETARVAQTLAVRALLVASPPGASGRREMLLQAADTGVALLTLPRPDEWLKS
DGAGPRRLELEDLLGRESVQLDVASLSGLLSGQTVLVTGAGGSIGAQLCRQIARFGVRRLVCVDICEFAVYQLEQELREA
HPQMQGCYYTANVREPARLLAIADKHRPAVVFHAAAYKHVPLMEELNAIEALRTNVAGSWHAARAAGVCGAGRFVMISTD
KAVNPTNVMGASKRLAELMVQSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPDIVRYFMTIAEAAQ
LVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISYTGLRPGEKLFEELLANDESSVATPHPKLRIAKT
SRQGLPDVASVLQWIGDADAEPEEAIRAWLRTLVPEYLVR

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 65136; Mature: 65136

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLRSPLVLFVADLALALLAWWLAFWLRFNLDIPEEFVQLALASSPWCVLAYGVGFAFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHH
RIDRQVWSYIGLPELRQLAIGIVLSGTLTAAGVLMLRLHAFPRSTLLLQPLLALVLMGAA
HHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RAGWRTFAERRLVARQGKPVLILGTLPQASDALRALKGSSQWQPVGILSPQPDEVGRSLQ
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHH
SVRVWGTPAETARVAQTLAVRALLVASPPGASGRREMLLQAADTGVALLTLPRPDEWLKS
HEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHC
DGAGPRRLELEDLLGRESVQLDVASLSGLLSGQTVLVTGAGGSIGAQLCRQIARFGVRRL
CCCCCCEEEHHHHHCCCHHEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
VCVDICEFAVYQLEQELREAHPQMQGCYYTANVREPARLLAIADKHRPAVVFHAAAYKHV
HHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCHHHHHHHCCCCCEEEEEEHHHHCC
PLMEELNAIEALRTNVAGSWHAARAAGVCGAGRFVMISTDKAVNPTNVMGASKRLAELMV
CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
QSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPDIVRYFMTIAEAAQ
HHHHHHHCCCEEEEEEECCEECCCCCEEHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH
LVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISYTGLRPGEKLFEEL
HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHH
LANDESSVATPHPKLRIAKTSRQGLPDVASVLQWIGDADAEPEEAIRAWLRTLVPEYLVR
HCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHFLRSPLVLFVADLALALLAWWLAFWLRFNLDIPEEFVQLALASSPWCVLAYGVGFAFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHH
RIDRQVWSYIGLPELRQLAIGIVLSGTLTAAGVLMLRLHAFPRSTLLLQPLLALVLMGAA
HHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RAGWRTFAERRLVARQGKPVLILGTLPQASDALRALKGSSQWQPVGILSPQPDEVGRSLQ
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHH
SVRVWGTPAETARVAQTLAVRALLVASPPGASGRREMLLQAADTGVALLTLPRPDEWLKS
HEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHC
DGAGPRRLELEDLLGRESVQLDVASLSGLLSGQTVLVTGAGGSIGAQLCRQIARFGVRRL
CCCCCCEEEHHHHHCCCHHEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
VCVDICEFAVYQLEQELREAHPQMQGCYYTANVREPARLLAIADKHRPAVVFHAAAYKHV
HHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCHHHHHHHCCCCCEEEEEEHHHHCC
PLMEELNAIEALRTNVAGSWHAARAAGVCGAGRFVMISTDKAVNPTNVMGASKRLAELMV
CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
QSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPDIVRYFMTIAEAAQ
HHHHHHHCCCEEEEEEECCEECCCCCEEHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH
LVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISYTGLRPGEKLFEEL
HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHH
LANDESSVATPHPKLRIAKTSRQGLPDVASVLQWIGDADAEPEEAIRAWLRTLVPEYLVR
HCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]