| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is engB [H]
Identifier: 121611742
GI number: 121611742
Start: 5353479
End: 5354165
Strand: Direct
Name: engB [H]
Synonym: Veis_4840
Alternate gene names: 121611742
Gene position: 5353479-5354165 (Clockwise)
Preceding gene: 121611738
Following gene: 121611746
Centisome position: 96.17
GC content: 67.25
Gene sequence:
>687_bases ATGACCAGCACCCCGATCACGCCCATGGCTGGCGCCCCGGCACCCGAGGCGAAGATCGCCATGGGCTGGATGCACACCGC CAAGTTCCTGACCACGGCCGCGCAACTGCACCATCTGCCGCCGCTGGCCGTGCCCGAAATCGCCTTCGTGGGCCGCTCCA ACGCCGGCAAATCCACCTGCATCAACACCCTCACCCAGCAAAAGCAACTGGCGTTTGCGTCGAAAAAACCGGGGCGCACC CAGCACATCAACCTGTTCGCACTGGGCCGGCAGGGCGTGATGGACGCCGTGCTGGCCGACCTGCCCGGCTACGGCTATGC CGCCGTCTCGCGCTCGGACAAAATGCGCTGGCAACAGGTGATGGTCAATTACCTGGTCAGCCGCCCGGGACTGACCGGCA TCGTGCTGCTGTGCGACCCCCGCCTGGGCCTGACCGGACTCGACGAAGCCCTGCTCGAAGTGTTGCGCCCGCGCGTGCAG CAGGGCCTGAAATTCCTCATCGTGCTGACCAAGGCCGACAAGCTCACACGCGCCGAGCAGGCCAAGGCGCTGTCCGTGAC GCGCTTGCAGGCCGGCGGCGGCCAGGTGCGGCTGTTCTCGGCCCTGAAAAAGCAAGGGGTCGACGAAGTGGCCTGGCTGC TGTGGCAATGGGCGCATCCGGCGGCGCCGGGCGCCGATTCAGCCTGA
Upstream 100 bases:
>100_bases GAGGGTTCTGTATTGGATGTGCGCAAAGCCCGGTGATTCTACAATGCGGCTCGCACGCATCCCAAGGCCTGGCCTTGTTC CCGACAACAAACAAGGCCCC
Downstream 100 bases:
>100_bases GGATTTTTTCACGGCAACCACGCGCTCGATTCCATGGAATCCGGAACGCCGACGAGGCCCGGTTCCGGGTCTGCCCCGCC GGGCCACGGCGGATCGGCGG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTSTPITPMAGAPAPEAKIAMGWMHTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRT QHINLFALGRQGVMDAVLADLPGYGYAAVSRSDKMRWQQVMVNYLVSRPGLTGIVLLCDPRLGLTGLDEALLEVLRPRVQ QGLKFLIVLTKADKLTRAEQAKALSVTRLQAGGGQVRLFSALKKQGVDEVAWLLWQWAHPAAPGADSA
Sequences:
>Translated_228_residues MTSTPITPMAGAPAPEAKIAMGWMHTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRT QHINLFALGRQGVMDAVLADLPGYGYAAVSRSDKMRWQQVMVNYLVSRPGLTGIVLLCDPRLGLTGLDEALLEVLRPRVQ QGLKFLIVLTKADKLTRAEQAKALSVTRLQAGGGQVRLFSALKKQGVDEVAWLLWQWAHPAAPGADSA >Mature_227_residues TSTPITPMAGAPAPEAKIAMGWMHTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQ HINLFALGRQGVMDAVLADLPGYGYAAVSRSDKMRWQQVMVNYLVSRPGLTGIVLLCDPRLGLTGLDEALLEVLRPRVQQ GLKFLIVLTKADKLTRAEQAKALSVTRLQAGGGQVRLFSALKKQGVDEVAWLLWQWAHPAAPGADSA
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=202, Percent_Identity=29.7029702970297, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI145693205, Length=201, Percent_Identity=44.2786069651741, Blast_Score=145, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 24554; Mature: 24423
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTPITPMAGAPAPEAKIAMGWMHTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHH INTLTQQKQLAFASKKPGRTQHINLFALGRQGVMDAVLADLPGYGYAAVSRSDKMRWQQV HHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHH MVNYLVSRPGLTGIVLLCDPRLGLTGLDEALLEVLRPRVQQGLKFLIVLTKADKLTRAEQ HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH AKALSVTRLQAGGGQVRLFSALKKQGVDEVAWLLWQWAHPAAPGADSA HHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSTPITPMAGAPAPEAKIAMGWMHTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHH INTLTQQKQLAFASKKPGRTQHINLFALGRQGVMDAVLADLPGYGYAAVSRSDKMRWQQV HHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHH MVNYLVSRPGLTGIVLLCDPRLGLTGLDEALLEVLRPRVQQGLKFLIVLTKADKLTRAEQ HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH AKALSVTRLQAGGGQVRLFSALKKQGVDEVAWLLWQWAHPAAPGADSA HHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA