| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is metK
Identifier: 121611746
GI number: 121611746
Start: 5356732
End: 5357943
Strand: Direct
Name: metK
Synonym: Veis_4844
Alternate gene names: 121611746
Gene position: 5356732-5357943 (Clockwise)
Preceding gene: 121611742
Following gene: 121611747
Centisome position: 96.23
GC content: 66.34
Gene sequence:
>1212_bases ATGGCGAACGACTTTCTCTTCACCTCGGAATCGGTCTCCGAAGGCCACCCCGACAAGGTGGCCGACCAAATCTCGGACGC GATTCTCGATGCCCTCTTGCGGCAAGACCCGCGCAGCCGCGTTGCCGCCGAGACATTGACCAACACCGGCCTGGTGGTGC TGGCCGGCGAGATCAGCACCAACGCCCATGTGGACTACATACAGGTGGCGCGCGACACCATCCGGCGCATCGGCTATGAC GACACCGACTACGGCATCGACTACAAGGGCTGCGCCGTGCTCGTGGCCTACGACAAGCAAAGCAACGACATCGCCCAGGG CGTGGACCATGCCAGCGACGACCATTTGAACACCGGCGCCGGCGACCAGGGCCTGATGTTCGGCTACGCCTGCGACGAAA CGCCCGAGCTGATGCCCGCGCCGATCTACTACGCGCACCGCCTCGTCGAGCGCCAGGCCCAGTTGCGCAAGGACGGGCGC CTGCCCTTTTTGCGCCCTGACGCCAAGAGCCAGGTCACGCTGCGCTATGTGGACGGCAAGCCCCACAGCATCGACACCGT GGTGCTCTCGACCCAGCACCACCCGGACCAATCGGCCACCGCCACCACCATGAAGCAGAGCTTCATAGACGCGGTGATCG AGGAAATCATCCGGCCCGTGCTGCCCAAAGAATGGCTGCACGACACGCGCTTCCTGATCAACCCCACCGGCCGCTTCGTC ACCGGCGGCCCGCAGGGCGACTGCGGCCTGACGGGCCGCAAGATCATCGTCGACACCTACGGCGGGGCCTGCCCGCATGG CGGCGGCGCGTTCAGCGGCAAGGACCCGACCAAGGTCGACCGCTCCGCCGCCTACGCCGCCCGCCATGTGGCCAAGAACG TCGTGGCCGCCGGTCTGGCGCGCCAATGCCAGATCCAGGTGGCTTACGCGATCGGCGTGGCCGAGCCGATGAACATCACC GTGTACACCGAGGGCACGGGTGTGATTGCCGACGAGCGCATCGCCGCGCTGATCAAGCAGCATTTCGACCTGCGCCCCCG GGGCATCATCCAGATGCTCGACCTGCTGCGCCCGATCTACGAAAAAACCGCCGCCTACGGCCACTTCGGCCGCGAAGAGC CTGAGTTCACCTGGGAGCGGACGGACAAAGCGGCTGCGCTGCGCGCGGCAGCCGGACTGTCACCCGGCGAGCACCACAGA AAAGAGGGCTGA
Upstream 100 bases:
>100_bases TTGCAGGGCGACGTTAAAAAACTCTGCTAAAGCGTTCGCCATAGCTCCTACGGGGTCAGGGCAACGCCCAAATGCCGAAC CACCACAGGAGTTTATTCAA
Downstream 100 bases:
>100_bases CAGCGCCGCCAGACCATGCGCCAGCGGCCCGCTGCAATGGACTGGCCAGAGACTAGTGTCGCGTCACGGATCAGATGTCG TAGGCTGCGCGCAGCCATCG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MANDFLFTSESVSEGHPDKVADQISDAILDALLRQDPRSRVAAETLTNTGLVVLAGEISTNAHVDYIQVARDTIRRIGYD DTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGR LPFLRPDAKSQVTLRYVDGKPHSIDTVVLSTQHHPDQSATATTMKQSFIDAVIEEIIRPVLPKEWLHDTRFLINPTGRFV TGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNIT VYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWERTDKAAALRAAAGLSPGEHHR KEG
Sequences:
>Translated_403_residues MANDFLFTSESVSEGHPDKVADQISDAILDALLRQDPRSRVAAETLTNTGLVVLAGEISTNAHVDYIQVARDTIRRIGYD DTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGR LPFLRPDAKSQVTLRYVDGKPHSIDTVVLSTQHHPDQSATATTMKQSFIDAVIEEIIRPVLPKEWLHDTRFLINPTGRFV TGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNIT VYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWERTDKAAALRAAAGLSPGEHHR KEG >Mature_402_residues ANDFLFTSESVSEGHPDKVADQISDAILDALLRQDPRSRVAAETLTNTGLVVLAGEISTNAHVDYIQVARDTIRRIGYDD TDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRL PFLRPDAKSQVTLRYVDGKPHSIDTVVLSTQHHPDQSATATTMKQSFIDAVIEEIIRPVLPKEWLHDTRFLINPTGRFVT GGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNITV YTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWERTDKAAALRAAAGLSPGEHHRK EG
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=57.1052631578947, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI5174529, Length=380, Percent_Identity=55.5263157894737, Blast_Score=400, Evalue=1e-112, Organism=Escherichia coli, GI1789311, Length=389, Percent_Identity=66.5809768637532, Blast_Score=515, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17538498, Length=381, Percent_Identity=54.5931758530184, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI25145633, Length=386, Percent_Identity=54.1450777202073, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17538494, Length=381, Percent_Identity=54.0682414698163, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17551082, Length=385, Percent_Identity=53.2467532467532, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565911, Length=335, Percent_Identity=51.6417910447761, Blast_Score=323, Evalue=8e-89, Organism=Caenorhabditis elegans, GI32565905, Length=381, Percent_Identity=48.5564304461942, Blast_Score=322, Evalue=2e-88, Organism=Caenorhabditis elegans, GI25145635, Length=338, Percent_Identity=51.1834319526627, Blast_Score=320, Evalue=9e-88, Organism=Caenorhabditis elegans, GI32565903, Length=308, Percent_Identity=51.2987012987013, Blast_Score=284, Evalue=7e-77, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=60.7142857142857, Blast_Score=114, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6320710, Length=384, Percent_Identity=56.5104166666667, Blast_Score=405, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6323209, Length=385, Percent_Identity=56.3636363636364, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI45552159, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580529, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580537, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580533, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580535, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580531, Length=380, Percent_Identity=52.3684210526316, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580527, Length=380, Percent_Identity=51.8421052631579, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580525, Length=380, Percent_Identity=51.8421052631579, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580541, Length=381, Percent_Identity=49.3438320209974, Blast_Score=338, Evalue=5e-93, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=57.1428571428571, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_VEREI (A1WSC8)
Other databases:
- EMBL: CP000542 - RefSeq: YP_999553.1 - ProteinModelPortal: A1WSC8 - SMR: A1WSC8 - STRING: A1WSC8 - GeneID: 4694186 - GenomeReviews: CP000542_GR - KEGG: vei:Veis_4844 - NMPDR: fig|391735.5.peg.4448 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: IYYAHRL - PhylomeDB: A1WSC8 - ProtClustDB: PRK05250 - BioCyc: VEIS391735:VEIS_4844-MONOMER - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 44032; Mature: 43901
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDFLFTSESVSEGHPDKVADQISDAILDALLRQDPRSRVAAETLTNTGLVVLAGEIST CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIRRIGYDDTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC GDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTLRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCC PHSIDTVVLSTQHHPDQSATATTMKQSFIDAVIEEIIRPVLPKEWLHDTRFLINPTGRFV CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCEE TGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLA ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQCQIQVAYAIGVAEPMNITVYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLRPIY HHHEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EKTAAYGHFGREEPEFTWERTDKAAALRAAAGLSPGEHHRKEG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC >Mature Secondary Structure ANDFLFTSESVSEGHPDKVADQISDAILDALLRQDPRSRVAAETLTNTGLVVLAGEIST CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIRRIGYDDTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC GDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTLRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCC PHSIDTVVLSTQHHPDQSATATTMKQSFIDAVIEEIIRPVLPKEWLHDTRFLINPTGRFV CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCEE TGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARHVAKNVVAAGLA ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQCQIQVAYAIGVAEPMNITVYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLRPIY HHHEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EKTAAYGHFGREEPEFTWERTDKAAALRAAAGLSPGEHHRKEG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA