Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611702

Identifier: 121611702

GI number: 121611702

Start: 5297533

End: 5298066

Strand: Direct

Name: 121611702

Synonym: Veis_4799

Alternate gene names: NA

Gene position: 5297533-5298066 (Clockwise)

Preceding gene: 121611701

Following gene: 121611711

Centisome position: 95.16

GC content: 69.1

Gene sequence:

>534_bases
ATGACACTCCCCCCGATTCGCCGGGTCGTCACCGGCATCAACCCGCAAGGCGAGTCCGCATTCATCGAGGACGGGCCTGC
TCCCGCAGTGCGCATGGTGCCGCAGCGCCCCGGCTATCGCGTGACCAATCTGTGGTGCACCGGCGCAGCGCCAGCCCCCG
TGGACGCTGCCGACGCCATTGCCGGGCACCAGGGCGTAGCGCCGGCCAAGGGCGGCACCGTGCTGCGCATCATCGACTTC
CCGCCCGAGCCGCAGGACCCGCAAGCGCTCGAACACATGCTGCAAGCCACCTTCGCCAGCATGTACCGCGACGCACGACA
TGCGCCGCGCGCCGGCGAGCATCCCGGCATGCACTGCACGCGCACCGTGGACTATGCGCTGATGCTGGAAGGCGAGTTGC
TGGCCATCATGGAAAGCAGTCAGACCACGCTGCGCGCGGGCGATGTGCTGATCCAGCGCGGCACCCGCCACGCATGGGCC
AACCGTTCGGGCCGCCCGGCGCGCATTGCCTTCGTTTTGGTCGATGGCCTCTGA

Upstream 100 bases:

>100_bases
CGGCCTACCTCGATGCAGCGCAGTTCAAGGCCCGCATCCTGCGCACTTACCAAGCCAACGCCGAACTGTTGCCCCACCTC
GACCTGGAAAGGCACTGAAG

Downstream 100 bases:

>100_bases
TGCGCCGCCCCGCCAATGGACGACCCATGGGGACTGCGCATGGCCTGTGCCGCCCTGCAAATGACGGCGCATGGCACCGC
GCCTTGCGCGCCAGGGCGGC

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Transcriptional Regulator Protein; Cupin Superfamily Protein; Cupin Domain-Containing Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTLPPIRRVVTGINPQGESAFIEDGPAPAVRMVPQRPGYRVTNLWCTGAAPAPVDAADAIAGHQGVAPAKGGTVLRIIDF
PPEPQDPQALEHMLQATFASMYRDARHAPRAGEHPGMHCTRTVDYALMLEGELLAIMESSQTTLRAGDVLIQRGTRHAWA
NRSGRPARIAFVLVDGL

Sequences:

>Translated_177_residues
MTLPPIRRVVTGINPQGESAFIEDGPAPAVRMVPQRPGYRVTNLWCTGAAPAPVDAADAIAGHQGVAPAKGGTVLRIIDF
PPEPQDPQALEHMLQATFASMYRDARHAPRAGEHPGMHCTRTVDYALMLEGELLAIMESSQTTLRAGDVLIQRGTRHAWA
NRSGRPARIAFVLVDGL
>Mature_176_residues
TLPPIRRVVTGINPQGESAFIEDGPAPAVRMVPQRPGYRVTNLWCTGAAPAPVDAADAIAGHQGVAPAKGGTVLRIIDFP
PEPQDPQALEHMLQATFASMYRDARHAPRAGEHPGMHCTRTVDYALMLEGELLAIMESSQTTLRAGDVLIQRGTRHAWAN
RSGRPARIAFVLVDGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19047; Mature: 18916

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPPIRRVVTGINPQGESAFIEDGPAPAVRMVPQRPGYRVTNLWCTGAAPAPVDAADAI
CCCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHHH
AGHQGVAPAKGGTVLRIIDFPPEPQDPQALEHMLQATFASMYRDARHAPRAGEHPGMHCT
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
RTVDYALMLEGELLAIMESSQTTLRAGDVLIQRGTRHAWANRSGRPARIAFVLVDGL
EEEEEEEEECCEEEEEEECCCCEEHHHHHHEECCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
TLPPIRRVVTGINPQGESAFIEDGPAPAVRMVPQRPGYRVTNLWCTGAAPAPVDAADAI
CCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHHH
AGHQGVAPAKGGTVLRIIDFPPEPQDPQALEHMLQATFASMYRDARHAPRAGEHPGMHCT
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
RTVDYALMLEGELLAIMESSQTTLRAGDVLIQRGTRHAWANRSGRPARIAFVLVDGL
EEEEEEEEECCEEEEEEECCCCEEHHHHHHEECCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA