| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611701
Identifier: 121611701
GI number: 121611701
Start: 5296589
End: 5297530
Strand: Direct
Name: 121611701
Synonym: Veis_4798
Alternate gene names: NA
Gene position: 5296589-5297530 (Clockwise)
Preceding gene: 121611699
Following gene: 121611702
Centisome position: 95.15
GC content: 67.09
Gene sequence:
>942_bases ATGAAAGCATGGATTGGCGTCATTTTCTTGTCCGTCGCCACACTGGCATGCGCGCAGGACAAACCCGCAGCCGGTGTCAC CGAGGTCATCGTTGCCTATTCGGCCGGCGGTGGTGTCGATCTGATGGCGCGCGCCTTTGCGCGCCAGGCCGCGCGCATGA GCGGACAGAACTGGGTCGTGACCAACCGCGACGGCGCTGCCGGCATCATCGGTTTTGCGGCGCTCGCGCGCGCCGCGCCC CATGGCCAGACCCTGGCGTTCTCGCCGGCCTCTCCGATCACCCATGCGCCCTTGCTTTTCAAGACCATGCCGTACCGCAA TGAACAGCTCGAGCCGGTATGCCAGGTGTTTGAAAACATCTTCACCATTGCCGTGCGCGCCGACTCTCCGATCCAGACCC TGCAGGATCTGACGGCGCGCGCCCGGGCCGCCCCCGGAAAACTGGTCTACGGCCATGCCGGCAACGGCTCTGTGCCGCAT CTGGGCGTTGCGGCCGTGGCCAAGGCGCTGGGGGTGCCATTCAATCCGGTGGCCTTCAAAGGCGATTCGGCGGTGCTGGC GCAGTTGCTCGGCGGCCATCTGGACTTCGCTGCGCCGGCCATTGCCTCGATCGCGGGCAAAGGTCTGCGTGTGCTGGCGC TGCTGTCCGACAGGCGCCACCCCTTGCTGCCCGAGGCCCCATCGCTGGCCGATCTGGGCTACCCCGCAGTGACCCCGGGT CTGAACGGCCTCTTTGCCCCGGCCGCAACCCCGCCCGCGACGCTCGCCCGAATCCAGGGGCTGTGCCAGAAGGTGGTGGC GTCTGACGGCTTCCGGCAGGCCGCGCTGGGACTGCACCAGGTGCCGGCCTACCTCGATGCAGCGCAGTTCAAGGCCCGCA TCCTGCGCACTTACCAAGCCAACGCCGAACTGTTGCCCCACCTCGACCTGGAAAGGCACTGA
Upstream 100 bases:
>100_bases GGGCCGCAGAAAAAGCCCCCGACTATAGCCTGTGGGCCGGGGCCTGTCATCAGCCATTGAACCGACGGCCAGCGCAAGCG GGCATTTCAGGACTCCCTCG
Downstream 100 bases:
>100_bases AGATGACACTCCCCCCGATTCGCCGGGTCGTCACCGGCATCAACCCGCAAGGCGAGTCCGCATTCATCGAGGACGGGCCT GCTCCCGCAGTGCGCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKAWIGVIFLSVATLACAQDKPAAGVTEVIVAYSAGGGVDLMARAFARQAARMSGQNWVVTNRDGAAGIIGFAALARAAP HGQTLAFSPASPITHAPLLFKTMPYRNEQLEPVCQVFENIFTIAVRADSPIQTLQDLTARARAAPGKLVYGHAGNGSVPH LGVAAVAKALGVPFNPVAFKGDSAVLAQLLGGHLDFAAPAIASIAGKGLRVLALLSDRRHPLLPEAPSLADLGYPAVTPG LNGLFAPAATPPATLARIQGLCQKVVASDGFRQAALGLHQVPAYLDAAQFKARILRTYQANAELLPHLDLERH
Sequences:
>Translated_313_residues MKAWIGVIFLSVATLACAQDKPAAGVTEVIVAYSAGGGVDLMARAFARQAARMSGQNWVVTNRDGAAGIIGFAALARAAP HGQTLAFSPASPITHAPLLFKTMPYRNEQLEPVCQVFENIFTIAVRADSPIQTLQDLTARARAAPGKLVYGHAGNGSVPH LGVAAVAKALGVPFNPVAFKGDSAVLAQLLGGHLDFAAPAIASIAGKGLRVLALLSDRRHPLLPEAPSLADLGYPAVTPG LNGLFAPAATPPATLARIQGLCQKVVASDGFRQAALGLHQVPAYLDAAQFKARILRTYQANAELLPHLDLERH >Mature_313_residues MKAWIGVIFLSVATLACAQDKPAAGVTEVIVAYSAGGGVDLMARAFARQAARMSGQNWVVTNRDGAAGIIGFAALARAAP HGQTLAFSPASPITHAPLLFKTMPYRNEQLEPVCQVFENIFTIAVRADSPIQTLQDLTARARAAPGKLVYGHAGNGSVPH LGVAAVAKALGVPFNPVAFKGDSAVLAQLLGGHLDFAAPAIASIAGKGLRVLALLSDRRHPLLPEAPSLADLGYPAVTPG LNGLFAPAATPPATLARIQGLCQKVVASDGFRQAALGLHQVPAYLDAAQFKARILRTYQANAELLPHLDLERH
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32616; Mature: 32616
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAWIGVIFLSVATLACAQDKPAAGVTEVIVAYSAGGGVDLMARAFARQAARMSGQNWVV CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCEEE TNRDGAAGIIGFAALARAAPHGQTLAFSPASPITHAPLLFKTMPYRNEQLEPVCQVFENI ECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH FTIAVRADSPIQTLQDLTARARAAPGKLVYGHAGNGSVPHLGVAAVAKALGVPFNPVAFK HEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEC GDSAVLAQLLGGHLDFAAPAIASIAGKGLRVLALLSDRRHPLLPEAPSLADLGYPAVTPG CCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCCCHHHCCCCCCCCC LNGLFAPAATPPATLARIQGLCQKVVASDGFRQAALGLHQVPAYLDAAQFKARILRTYQA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAELLPHLDLERH CCHHCCCCCCCCC >Mature Secondary Structure MKAWIGVIFLSVATLACAQDKPAAGVTEVIVAYSAGGGVDLMARAFARQAARMSGQNWVV CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCEEE TNRDGAAGIIGFAALARAAPHGQTLAFSPASPITHAPLLFKTMPYRNEQLEPVCQVFENI ECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH FTIAVRADSPIQTLQDLTARARAAPGKLVYGHAGNGSVPHLGVAAVAKALGVPFNPVAFK HEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEC GDSAVLAQLLGGHLDFAAPAIASIAGKGLRVLALLSDRRHPLLPEAPSLADLGYPAVTPG CCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCCCHHHCCCCCCCCC LNGLFAPAATPPATLARIQGLCQKVVASDGFRQAALGLHQVPAYLDAAQFKARILRTYQA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAELLPHLDLERH CCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]