| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ssuA [C]
Identifier: 121611671
GI number: 121611671
Start: 5262097
End: 5263143
Strand: Direct
Name: ssuA [C]
Synonym: Veis_4767
Alternate gene names: 121611671
Gene position: 5262097-5263143 (Clockwise)
Preceding gene: 121611670
Following gene: 121611672
Centisome position: 94.53
GC content: 62.85
Gene sequence:
>1047_bases ATGGGCATTTCCACCCCTGTGCGGGTATCTTGCGGCGCCAGCGGGCCGGCGGGCTGGACCCGCCGGCTGTTCAAACCCTT GCTCAGCCTGGTGCTCGCCGCCGCTGCAAGCGCTGCGTCCGGCGCCGGTCCGGCGCGCATGAAGATCGGCACCACGGTCT GGATCGGCTACGGGCCTTTTTACGTGGCCGAGGCGCTGGACCTGTACAAGAAGCACAACCTGCAGGTATCGCTGCAGGTG TTCAGCGATCCGGCGCTGATTGCGTCCGCGATTGCCAGCGGTGCGATCGACGGCGGCACGCTGACCTATGACCAGGTGAT CGGCCAAGTGGCCGCAGGCCGGGCCCAGAAAGTGGTGCTGCCGATCGATTACTCCAACGGCGGCGACGCCATCGTGGCCG ACAAGACCATTGCCAGGCTGGCCGACTTCAAGGGCCAAAAAATCGGCTTCAACCCCTTGTCGCCGTCCGACTTTCTGCTG ACCTATGCCCTGAAGACGGCCGGTCTGACGGACAAGGACATCACCCCCGTCAGCATGACGCCCGAAAGCGTGCCTGCGGC GATGGCCTCCGGCCAGATGTCCATCGGGGTGACCTATGAGCCCAGCCTGTCGCAGATCCTCGGCCAGGGCGGCGGCAAGA AATTCAAGGTGGTTTTTTCCTCCAGGGAAACGCCGGGCCTGATTGCCGATGTGCTGGTGTTCGACGACAAAACCATACAG GCCAGGCCGGCCGAGATTTCCGCCATCATCGGGGCCTACCTCGATGGCCTGGCGTACATGAAGGCCAAACCGGACGATGC CGCCAAGATCATTGGCAAGTTCATGGGCGTGACGCCCAAGCAGGTCAAGGAACAGCTCTCCGGCGTGTACAACATCCCGA TGGCTGAAATGCCCAAGGCTTTCGCCAAATCCGCAGACACCACCTCCTACTACGGCAGTGCCGAGGTGATCGGCAAACTG CTGCTGGACAAGGGCCAGATCAAGGCCATTCCTGCGATCGAGGCCACGATGGACGCGCGGTTCGTGACGGCCCTGACGAA AAAGTGA
Upstream 100 bases:
>100_bases CGGGCAGGGCTTTCCTTGGCTCATGCCCGGTCAGGGGCACCATGCCCGCGCCAAAGTGCTGTCGTGCGGCGTCTTTCATT CACTCCAGCGGAGTTTCCCG
Downstream 100 bases:
>100_bases GCCGGGTTGCCAAACCATTGCCATTGCCAAGGCCAGGCCCGGACGCATTCCGCCGGATGGAGACCCACGCCATGCCATCC ATCTACCGCCATCCCGATGG
Product: NlpA lipoprotein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Taurine Transport System Protein; NlpA Lipoprotein; NMT1/THI5-Like Domain-Containing Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; NMT1/THI5 Like Family; ABC Transporter; Nmt1/Thi5 Like Domain Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQV FSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLL TYALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKL LLDKGQIKAIPAIEATMDARFVTALTKK
Sequences:
>Translated_348_residues MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQV FSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLL TYALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKL LLDKGQIKAIPAIEATMDARFVTALTKK >Mature_347_residues GISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQVF SDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLT YALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQA RPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKLL LDKGQIKAIPAIEATMDARFVTALTKK
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36404; Mature: 36272
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPF CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCHH YVAEALDLYKKHNLQVSLQVFSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVL HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEEE PIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLTYALKTAGLTDKDITPVSMT EEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC PESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ CHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCCHHHHHHH FAKSADTTSYYGSAEVIGKLLLDKGQIKAIPAIEATMDARFVTALTKK HHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPF CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCHH YVAEALDLYKKHNLQVSLQVFSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVL HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEEE PIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLTYALKTAGLTDKDITPVSMT EEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC PESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ CHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCCHHHHHHH FAKSADTTSYYGSAEVIGKLLLDKGQIKAIPAIEATMDARFVTALTKK HHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA