Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is ssuA [C]

Identifier: 121611671

GI number: 121611671

Start: 5262097

End: 5263143

Strand: Direct

Name: ssuA [C]

Synonym: Veis_4767

Alternate gene names: 121611671

Gene position: 5262097-5263143 (Clockwise)

Preceding gene: 121611670

Following gene: 121611672

Centisome position: 94.53

GC content: 62.85

Gene sequence:

>1047_bases
ATGGGCATTTCCACCCCTGTGCGGGTATCTTGCGGCGCCAGCGGGCCGGCGGGCTGGACCCGCCGGCTGTTCAAACCCTT
GCTCAGCCTGGTGCTCGCCGCCGCTGCAAGCGCTGCGTCCGGCGCCGGTCCGGCGCGCATGAAGATCGGCACCACGGTCT
GGATCGGCTACGGGCCTTTTTACGTGGCCGAGGCGCTGGACCTGTACAAGAAGCACAACCTGCAGGTATCGCTGCAGGTG
TTCAGCGATCCGGCGCTGATTGCGTCCGCGATTGCCAGCGGTGCGATCGACGGCGGCACGCTGACCTATGACCAGGTGAT
CGGCCAAGTGGCCGCAGGCCGGGCCCAGAAAGTGGTGCTGCCGATCGATTACTCCAACGGCGGCGACGCCATCGTGGCCG
ACAAGACCATTGCCAGGCTGGCCGACTTCAAGGGCCAAAAAATCGGCTTCAACCCCTTGTCGCCGTCCGACTTTCTGCTG
ACCTATGCCCTGAAGACGGCCGGTCTGACGGACAAGGACATCACCCCCGTCAGCATGACGCCCGAAAGCGTGCCTGCGGC
GATGGCCTCCGGCCAGATGTCCATCGGGGTGACCTATGAGCCCAGCCTGTCGCAGATCCTCGGCCAGGGCGGCGGCAAGA
AATTCAAGGTGGTTTTTTCCTCCAGGGAAACGCCGGGCCTGATTGCCGATGTGCTGGTGTTCGACGACAAAACCATACAG
GCCAGGCCGGCCGAGATTTCCGCCATCATCGGGGCCTACCTCGATGGCCTGGCGTACATGAAGGCCAAACCGGACGATGC
CGCCAAGATCATTGGCAAGTTCATGGGCGTGACGCCCAAGCAGGTCAAGGAACAGCTCTCCGGCGTGTACAACATCCCGA
TGGCTGAAATGCCCAAGGCTTTCGCCAAATCCGCAGACACCACCTCCTACTACGGCAGTGCCGAGGTGATCGGCAAACTG
CTGCTGGACAAGGGCCAGATCAAGGCCATTCCTGCGATCGAGGCCACGATGGACGCGCGGTTCGTGACGGCCCTGACGAA
AAAGTGA

Upstream 100 bases:

>100_bases
CGGGCAGGGCTTTCCTTGGCTCATGCCCGGTCAGGGGCACCATGCCCGCGCCAAAGTGCTGTCGTGCGGCGTCTTTCATT
CACTCCAGCGGAGTTTCCCG

Downstream 100 bases:

>100_bases
GCCGGGTTGCCAAACCATTGCCATTGCCAAGGCCAGGCCCGGACGCATTCCGCCGGATGGAGACCCACGCCATGCCATCC
ATCTACCGCCATCCCGATGG

Product: NlpA lipoprotein

Products: NA

Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Taurine Transport System Protein; NlpA Lipoprotein; NMT1/THI5-Like Domain-Containing Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; NMT1/THI5 Like Family; ABC Transporter; Nmt1/Thi5 Like Domain Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQV
FSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLL
TYALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ
ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKL
LLDKGQIKAIPAIEATMDARFVTALTKK

Sequences:

>Translated_348_residues
MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQV
FSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLL
TYALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ
ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKL
LLDKGQIKAIPAIEATMDARFVTALTKK
>Mature_347_residues
GISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPFYVAEALDLYKKHNLQVSLQVF
SDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVLPIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLT
YALKTAGLTDKDITPVSMTPESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQA
RPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKAFAKSADTTSYYGSAEVIGKLL
LDKGQIKAIPAIEATMDARFVTALTKK

Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36404; Mature: 36272

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPF
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCHH
YVAEALDLYKKHNLQVSLQVFSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVL
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEEE
PIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLTYALKTAGLTDKDITPVSMT
EEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ
CHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCCHHHHHHH
FAKSADTTSYYGSAEVIGKLLLDKGQIKAIPAIEATMDARFVTALTKK
HHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GISTPVRVSCGASGPAGWTRRLFKPLLSLVLAAAASAASGAGPARMKIGTTVWIGYGPF
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCHH
YVAEALDLYKKHNLQVSLQVFSDPALIASAIASGAIDGGTLTYDQVIGQVAAGRAQKVVL
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEEE
PIDYSNGGDAIVADKTIARLADFKGQKIGFNPLSPSDFLLTYALKTAGLTDKDITPVSMT
EEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PESVPAAMASGQMSIGVTYEPSLSQILGQGGGKKFKVVFSSRETPGLIADVLVFDDKTIQ
CHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
ARPAEISAIIGAYLDGLAYMKAKPDDAAKIIGKFMGVTPKQVKEQLSGVYNIPMAEMPKA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCCHHHHHHH
FAKSADTTSYYGSAEVIGKLLLDKGQIKAIPAIEATMDARFVTALTKK
HHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA