| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611672
Identifier: 121611672
GI number: 121611672
Start: 5263215
End: 5263532
Strand: Direct
Name: 121611672
Synonym: Veis_4768
Alternate gene names: NA
Gene position: 5263215-5263532 (Clockwise)
Preceding gene: 121611671
Following gene: 121611673
Centisome position: 94.55
GC content: 67.61
Gene sequence:
>318_bases ATGCCATCCATCTACCGCCATCCCGATGGCGTCTGGCCCAACACCCTGGCGCTGGCCGCCACGCTGCTGACTTACCCGGC GGGCCTGGGTCTGCTGCTGGTGCCCGGCATGGGCTGGGCGCTGGCGTGCAATGCGCTGGGCCTGTTCCTGCTGGTGCTGA GCCTGGTGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATA CAGCTCGGTATGGGCTGCGCGATGCGCCTTGCGCTGCGCTCCGATGGCGGCGCGCAGCCTGCGACATCTGATCCGTGA
Upstream 100 bases:
>100_bases GGTTCGTGACGGCCCTGACGAAAAAGTGAGCCGGGTTGCCAAACCATTGCCATTGCCAAGGCCAGGCCCGGACGCATTCC GCCGGATGGAGACCCACGCC
Downstream 100 bases:
>100_bases CGCGACACTAGTCTGTTCCGCCTATTTCATCCACGAGTTTGCGCACCAGACGATTTTCAGGAGCGCGCAGGCGAATGCCC GCTGGGGCCTGCTGATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPSIYRHPDGVWPNTLALAATLLTYPAGLGLLLVPGMGWALACNALGLFLLVLSLVSRHRSSVGLRWPSKRIAALHRLPI QLGMGCAMRLALRSDGGAQPATSDP
Sequences:
>Translated_105_residues MPSIYRHPDGVWPNTLALAATLLTYPAGLGLLLVPGMGWALACNALGLFLLVLSLVSRHRSSVGLRWPSKRIAALHRLPI QLGMGCAMRLALRSDGGAQPATSDP >Mature_104_residues PSIYRHPDGVWPNTLALAATLLTYPAGLGLLLVPGMGWALACNALGLFLLVLSLVSRHRSSVGLRWPSKRIAALHRLPIQ LGMGCAMRLALRSDGGAQPATSDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11138; Mature: 11007
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIYRHPDGVWPNTLALAATLLTYPAGLGLLLVPGMGWALACNALGLFLLVLSLVSRHR CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH SSVGLRWPSKRIAALHRLPIQLGMGCAMRLALRSDGGAQPATSDP HHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PSIYRHPDGVWPNTLALAATLLTYPAGLGLLLVPGMGWALACNALGLFLLVLSLVSRHR CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH SSVGLRWPSKRIAALHRLPIQLGMGCAMRLALRSDGGAQPATSDP HHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA