| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611664
Identifier: 121611664
GI number: 121611664
Start: 5253741
End: 5255084
Strand: Direct
Name: 121611664
Synonym: Veis_4760
Alternate gene names: NA
Gene position: 5253741-5255084 (Clockwise)
Preceding gene: 121611663
Following gene: 121611666
Centisome position: 94.38
GC content: 66.74
Gene sequence:
>1344_bases ATGGATTGGCAGCCAGGCTGGGATCTGCATATCGGCGCGGCCAGTACGGCCGGCATGCCATGCCCATTGCCCGAAGGCCA CAGGCCCTCCGATCCGGCGACCGAGATCATGGAAGACATGGCCTTGCTCGAACAGGTGCTGGCGCAGTTGGTCGGGGACG ACGAGGGCGCGGTGCCCGACACGGACAGGCTCGCACTGGATGTGGACATGTCGACGGGCCTCATGCCCCACGGGACTGAC CCGCCCGGCCCGGCCGACGCGATGGATGTGGGCCAGATGCTGGAGCAGATTGCACGCGATGCGCGTTTGCTGCCCGCTGT ACGGCAAGCCGTGAAAAGCCTGGAGCCTGCCCTGCTGCAACTGGCGCAAACCGACGCCCGCTTTTTCACCGACGGCGCCC ATCCCGCACGCCGCCTGCTCGATACGCTGACACAGCGCAGTCTGGCCTTCACACAAGAGGCGACGCCCGGGTTCAGCCAG TTCATGCACCTGACGACCCAGGCCGTACAGCATTTGTCCACCAGCCAGCCCAAGGATGCGGACCTCTTCGGCGCCGTGCT CGATGCCTGGCAGACGCAATGGAACGCGCAAGAGCAGAAAAGCAAGGATCGGCAGCAAGCCGAGCGACGCAAACTGCTGG CCGAACAGGTGGCGGCCGACATCCGCGAGTTGCCCGACATCGGGCAGGTGCCGGCCGACATCCTGGAGTTCGCCACCGGC CCCTGGGCGGAGGTGGTGGCTTTGGCGCAGTTGACGCAGGGCGAGGATGGGCAAGAACGCCGGCAGGAGCCGGGAGCTGG CGAAAACGATGATCCGCAGGGCTACCGCAGGCTGATCCCGGCGCTGCTATGGAGCGCCCAGCCCGGTCTGACGCGGCAAA ACACGGCGCTGCTCAACGAGGTCATTCCGGCGCTGCTGGCCCAACTGCGCGCGGGCCTCGTGAGCATCGACTACCCGCCC GCGCAGACCAGCGCCTTGTTGCAGCGGCTGGTGGGCTTGCACCAGGCGGCTTTCGAGGAAAGCACCGCAGAGACGCAAAA TACCCGGGCGACAGTCGCCGCGCCGGCCCCGGAGGTGAGCGAACCGGGCGACCCCGACCCGTATGCCGATTTCGTGGTCG GCGCCTGGGTCGATCTGACCACCAATGAGCATGTGGTCCGCACCCAACTGACCTGGGCCAGTCCGCAGGGCACGCTGTTC ATGTTCACGGCGCCCGATACCAGCACCCAGTCGATGACCCGGCGCATGCGCAACAAACTGGCCTCGGAGGGCTTGCTGCG CGTGGTGCCGGCAGACGCCAAACCGCTCAGTCCAAAAGGGCCTGGGAAAACTCGCGCGCGTTGA
Upstream 100 bases:
>100_bases CGCTGGACTACACTGTGCTGGCCGCTCCTCTCCAAAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAATAAC
Downstream 100 bases:
>100_bases AGGTCTCCAGGTCTTCGAGCTTTTCGCCCACGCCGATGAAATAGACCGGTATCGGGCGCTCTTGCGCAATCGCGGCCAGC ACGCCGCCCTTGGCCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MDWQPGWDLHIGAASTAGMPCPLPEGHRPSDPATEIMEDMALLEQVLAQLVGDDEGAVPDTDRLALDVDMSTGLMPHGTD PPGPADAMDVGQMLEQIARDARLLPAVRQAVKSLEPALLQLAQTDARFFTDGAHPARRLLDTLTQRSLAFTQEATPGFSQ FMHLTTQAVQHLSTSQPKDADLFGAVLDAWQTQWNAQEQKSKDRQQAERRKLLAEQVAADIRELPDIGQVPADILEFATG PWAEVVALAQLTQGEDGQERRQEPGAGENDDPQGYRRLIPALLWSAQPGLTRQNTALLNEVIPALLAQLRAGLVSIDYPP AQTSALLQRLVGLHQAAFEESTAETQNTRATVAAPAPEVSEPGDPDPYADFVVGAWVDLTTNEHVVRTQLTWASPQGTLF MFTAPDTSTQSMTRRMRNKLASEGLLRVVPADAKPLSPKGPGKTRAR
Sequences:
>Translated_447_residues MDWQPGWDLHIGAASTAGMPCPLPEGHRPSDPATEIMEDMALLEQVLAQLVGDDEGAVPDTDRLALDVDMSTGLMPHGTD PPGPADAMDVGQMLEQIARDARLLPAVRQAVKSLEPALLQLAQTDARFFTDGAHPARRLLDTLTQRSLAFTQEATPGFSQ FMHLTTQAVQHLSTSQPKDADLFGAVLDAWQTQWNAQEQKSKDRQQAERRKLLAEQVAADIRELPDIGQVPADILEFATG PWAEVVALAQLTQGEDGQERRQEPGAGENDDPQGYRRLIPALLWSAQPGLTRQNTALLNEVIPALLAQLRAGLVSIDYPP AQTSALLQRLVGLHQAAFEESTAETQNTRATVAAPAPEVSEPGDPDPYADFVVGAWVDLTTNEHVVRTQLTWASPQGTLF MFTAPDTSTQSMTRRMRNKLASEGLLRVVPADAKPLSPKGPGKTRAR >Mature_447_residues MDWQPGWDLHIGAASTAGMPCPLPEGHRPSDPATEIMEDMALLEQVLAQLVGDDEGAVPDTDRLALDVDMSTGLMPHGTD PPGPADAMDVGQMLEQIARDARLLPAVRQAVKSLEPALLQLAQTDARFFTDGAHPARRLLDTLTQRSLAFTQEATPGFSQ FMHLTTQAVQHLSTSQPKDADLFGAVLDAWQTQWNAQEQKSKDRQQAERRKLLAEQVAADIRELPDIGQVPADILEFATG PWAEVVALAQLTQGEDGQERRQEPGAGENDDPQGYRRLIPALLWSAQPGLTRQNTALLNEVIPALLAQLRAGLVSIDYPP AQTSALLQRLVGLHQAAFEESTAETQNTRATVAAPAPEVSEPGDPDPYADFVVGAWVDLTTNEHVVRTQLTWASPQGTLF MFTAPDTSTQSMTRRMRNKLASEGLLRVVPADAKPLSPKGPGKTRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48529; Mature: 48529
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWQPGWDLHIGAASTAGMPCPLPEGHRPSDPATEIMEDMALLEQVLAQLVGDDEGAVPD CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TDRLALDVDMSTGLMPHGTDPPGPADAMDVGQMLEQIARDARLLPAVRQAVKSLEPALLQ CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQTDARFFTDGAHPARRLLDTLTQRSLAFTQEATPGFSQFMHLTTQAVQHLSTSQPKDA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH DLFGAVLDAWQTQWNAQEQKSKDRQQAERRKLLAEQVAADIRELPDIGQVPADILEFATG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC PWAEVVALAQLTQGEDGQERRQEPGAGENDDPQGYRRLIPALLWSAQPGLTRQNTALLNE CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VIPALLAQLRAGLVSIDYPPAQTSALLQRLVGLHQAAFEESTAETQNTRATVAAPAPEVS HHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC EPGDPDPYADFVVGAWVDLTTNEHVVRTQLTWASPQGTLFMFTAPDTSTQSMTRRMRNKL CCCCCCHHHHHHHHHHEEECCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH ASEGLLRVVPADAKPLSPKGPGKTRAR HHCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDWQPGWDLHIGAASTAGMPCPLPEGHRPSDPATEIMEDMALLEQVLAQLVGDDEGAVPD CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TDRLALDVDMSTGLMPHGTDPPGPADAMDVGQMLEQIARDARLLPAVRQAVKSLEPALLQ CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQTDARFFTDGAHPARRLLDTLTQRSLAFTQEATPGFSQFMHLTTQAVQHLSTSQPKDA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH DLFGAVLDAWQTQWNAQEQKSKDRQQAERRKLLAEQVAADIRELPDIGQVPADILEFATG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC PWAEVVALAQLTQGEDGQERRQEPGAGENDDPQGYRRLIPALLWSAQPGLTRQNTALLNE CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VIPALLAQLRAGLVSIDYPPAQTSALLQRLVGLHQAAFEESTAETQNTRATVAAPAPEVS HHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC EPGDPDPYADFVVGAWVDLTTNEHVVRTQLTWASPQGTLFMFTAPDTSTQSMTRRMRNKL CCCCCCHHHHHHHHHHEEECCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH ASEGLLRVVPADAKPLSPKGPGKTRAR HHCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA