| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611524
Identifier: 121611524
GI number: 121611524
Start: 5108423
End: 5108761
Strand: Direct
Name: 121611524
Synonym: Veis_4615
Alternate gene names: NA
Gene position: 5108423-5108761 (Clockwise)
Preceding gene: 121611523
Following gene: 121611535
Centisome position: 91.77
GC content: 67.85
Gene sequence:
>339_bases GTGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACGCTC GGTATTGGCTGCGCGATGCGCCTTGCGCTGCGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCCGTGACGCGACAC TAGGGCCAGTCATCCGGTGCGCGGGCTTGCGCCCGGTTCGTCAATCCACCTTGTCCGGTGCCGACTGTTGCCGCAGCCCC GCCGGCCGTCTGGGTTCCTCCGCGTCCACTCGTCGCGGCGACCGCAGTCGTCGGCACGGTGGCGGCGTCTGGGCCTCGAG GGCCTTTACTTGCGCCTGA
Upstream 100 bases:
>100_bases AGGATTACGAAAGGCGTTGGGCTTCAATGATGGCGGGTCGCGCCGACCGGGTCGCCCCGTGACCGTGTGGCCGTAGAGGG GCCTCTGACGAAGACGTCTA
Downstream 100 bases:
>100_bases TCGGGCTCCTGGCAGCGCTTGCGATGGCGCTCGAATCCGCAGATGCGCATCGCTCGATGCGTGTCATCGGGGTCACCAGC GCGGGCGGGTGAATTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSRHRSSVGLRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIRDATLGPVIRCAGLRPVRQSTLSGADCCRSP AGRLGSSASTRRGDRSRRHGGGVWASRAFTCA
Sequences:
>Translated_112_residues MSRHRSSVGLRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIRDATLGPVIRCAGLRPVRQSTLSGADCCRSP AGRLGSSASTRRGDRSRRHGGGVWASRAFTCA >Mature_111_residues SRHRSSVGLRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIRDATLGPVIRCAGLRPVRQSTLSGADCCRSPA GRLGSSASTRRGDRSRRHGGGVWASRAFTCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12112; Mature: 11981
Theoretical pI: Translated: 12.58; Mature: 12.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHRSSVGLRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIRDATLGPVIRC CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGLRPVRQSTLSGADCCRSPAGRLGSSASTRRGDRSRRHGGGVWASRAFTCA CCCCHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRHRSSVGLRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIRDATLGPVIRC CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGLRPVRQSTLSGADCCRSPAGRLGSSASTRRGDRSRRHGGGVWASRAFTCA CCCCHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA