Click here to switch to the map view.

The map label for this gene is ycjN [C]

Identifier: 121611426

GI number: 121611426

Start: 4996630

End: 4997928

Strand: Direct

Name: ycjN [C]

Synonym: Veis_4516

Alternate gene names: 121611426

Gene position: 4996630-4997928 (Clockwise)

Preceding gene: 121611425

Following gene: 121611427

Centisome position: 89.76

GC content: 59.2

Gene sequence:

>1299_bases
ATGAACATCACGCGCGCCCGGTTTCTGAAATCCACCATTGGCGCCAGTCTGGCGCTGTCCCAGCCGTTGCGCGCACTCGC
AGCGCCGACCCAACTCAAGGGCACGGTGACCTATCTCACCTACGAGTCGCTGCCAACCACCAAGAAGGTGATTGGCGACC
TGTTCGCCGAGATCGAGGCGGCCAACCCTGGTTTGAAAATCAAACCGCTATTCACGTCGCCAGAGGCCGTGCGCAAGCAG
GTGTCGTCCATGTTGCAGAGCCGCACCGCACCGGACATCGTCAATCTCGACATCGAAGACGCGCTGCTGTACTCGCGCGG
CGGATTGCTGGCGCCGATCAACCCATTGACTGCGGTCCTGCCTGACGCATGGCGTGTGCGGCCGGACGGCAAGAACGATT
TTTTCGTGCCCAACGGCATCAAGTTCACCTACTCGTGGTATCGCGCCGACCTGTTCGAGAAAGCCGGGTTGCAGCCCCCA
AAGACTTGGGATGAGTACGAGAGGGCGGCGGCCAAGCTCACGGGCAGCGGCCAGTACGGCTGCATCATCAACAGCAACAC
CAGTGGCGATAACCCGGTCAGCGCGTTGTACAGCTATGCCATGTCCAATGGCGTGACCTTCTTCGATGACGAAGGCAACC
TCTTGTTCGACCAGGGCGAGAACCGCAAACGCTTGGTGGAAACGCTTGCCTTCCTGCAGCGCATGTCCAAGTACTCGCCG
AGCACTACCAACTTCGCTTGGGCAGATGTGATGAATTCGTATGCATCGGGCAGGATCGCGATGGCCGACTACATTGGCGC
GCGCTTCTTCGCGGTGGTATCGCAGAACAACGCCGAGATTGCGAAGGTCACCAAGCCCTTTGTCCAGCCTTACGGCATGG
CTGCGGCCAATCGCCTGTCTGCCGAGGGCTACATGGTTTTCAAAGATTCGCAGAATGTCGAGTCGGCCAAGGCCATCATC
CACTACCTGCGCGAGGGTCAGCGCTATTACGAGTTTCTTTGGTCCATTCCGATGCATGTATTGCCGGTGGCCAAGAAGGA
TTTCGAAGGTCCTTACCAAGCCAATGAATACGTCAAAAGCAAGCCCGAAATTTCCCGGGTCATTTCCGAGGCATGGGACG
GTTCGCGCAACCCGGTGTTCGACCTCACGGGCAAGAAACCCGCTTGGCAGCGCGCCAAGGTCTATACCAGCACGATCTAC
AACAAGATGCTGGCCAATGTGATTCAGGGCGGCATCGCGCCGGACGCGGCTGTGACCGACGCGGCGCAAGCAGCCCGCGC
CCTGCTCAAGTTCGCCTGA

Upstream 100 bases:

>100_bases
ACCTGATCATCCGCGGCTCTACGGGGCGCCACCCTTTCCCCGCTTTGGGCTAAGGGCTACGCCCGTCGAACTGCATCCAT
CAAAACCAACGGAGACAACG

Downstream 100 bases:

>100_bases
ACAGGGCCGACATGCGCAGCCGACGCGCCAGGAGCGAGGGGAACTCCCGCCTGGATTTCATCAGCGTGTCCTTCACGCTC
GTGGTCTTGGTCTTCATCGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MNITRARFLKSTIGASLALSQPLRALAAPTQLKGTVTYLTYESLPTTKKVIGDLFAEIEAANPGLKIKPLFTSPEAVRKQ
VSSMLQSRTAPDIVNLDIEDALLYSRGGLLAPINPLTAVLPDAWRVRPDGKNDFFVPNGIKFTYSWYRADLFEKAGLQPP
KTWDEYERAAAKLTGSGQYGCIINSNTSGDNPVSALYSYAMSNGVTFFDDEGNLLFDQGENRKRLVETLAFLQRMSKYSP
STTNFAWADVMNSYASGRIAMADYIGARFFAVVSQNNAEIAKVTKPFVQPYGMAAANRLSAEGYMVFKDSQNVESAKAII
HYLREGQRYYEFLWSIPMHVLPVAKKDFEGPYQANEYVKSKPEISRVISEAWDGSRNPVFDLTGKKPAWQRAKVYTSTIY
NKMLANVIQGGIAPDAAVTDAAQAARALLKFA

Sequences:

>Translated_432_residues
MNITRARFLKSTIGASLALSQPLRALAAPTQLKGTVTYLTYESLPTTKKVIGDLFAEIEAANPGLKIKPLFTSPEAVRKQ
VSSMLQSRTAPDIVNLDIEDALLYSRGGLLAPINPLTAVLPDAWRVRPDGKNDFFVPNGIKFTYSWYRADLFEKAGLQPP
KTWDEYERAAAKLTGSGQYGCIINSNTSGDNPVSALYSYAMSNGVTFFDDEGNLLFDQGENRKRLVETLAFLQRMSKYSP
STTNFAWADVMNSYASGRIAMADYIGARFFAVVSQNNAEIAKVTKPFVQPYGMAAANRLSAEGYMVFKDSQNVESAKAII
HYLREGQRYYEFLWSIPMHVLPVAKKDFEGPYQANEYVKSKPEISRVISEAWDGSRNPVFDLTGKKPAWQRAKVYTSTIY
NKMLANVIQGGIAPDAAVTDAAQAARALLKFA
>Mature_432_residues
MNITRARFLKSTIGASLALSQPLRALAAPTQLKGTVTYLTYESLPTTKKVIGDLFAEIEAANPGLKIKPLFTSPEAVRKQ
VSSMLQSRTAPDIVNLDIEDALLYSRGGLLAPINPLTAVLPDAWRVRPDGKNDFFVPNGIKFTYSWYRADLFEKAGLQPP
KTWDEYERAAAKLTGSGQYGCIINSNTSGDNPVSALYSYAMSNGVTFFDDEGNLLFDQGENRKRLVETLAFLQRMSKYSP
STTNFAWADVMNSYASGRIAMADYIGARFFAVVSQNNAEIAKVTKPFVQPYGMAAANRLSAEGYMVFKDSQNVESAKAII
HYLREGQRYYEFLWSIPMHVLPVAKKDFEGPYQANEYVKSKPEISRVISEAWDGSRNPVFDLTGKKPAWQRAKVYTSTIY
NKMLANVIQGGIAPDAAVTDAAQAARALLKFA

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787569, Length=379, Percent_Identity=22.6912928759894, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47783; Mature: 47783

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITRARFLKSTIGASLALSQPLRALAAPTQLKGTVTYLTYESLPTTKKVIGDLFAEIEA
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
ANPGLKIKPLFTSPEAVRKQVSSMLQSRTAPDIVNLDIEDALLYSRGGLLAPINPLTAVL
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCCCHHHHHC
PDAWRVRPDGKNDFFVPNGIKFTYSWYRADLFEKAGLQPPKTWDEYERAAAKLTGSGQYG
CCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEE
CIINSNTSGDNPVSALYSYAMSNGVTFFDDEGNLLFDQGENRKRLVETLAFLQRMSKYSP
EEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
STTNFAWADVMNSYASGRIAMADYIGARFFAVVSQNNAEIAKVTKPFVQPYGMAAANRLS
CCCCCHHHHHHHHHCCCCEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCHHHHHHCC
AEGYMVFKDSQNVESAKAIIHYLREGQRYYEFLWSIPMHVLPVAKKDFEGPYQANEYVKS
CCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHCHHHCCCCCCCHHHHHHC
KPEISRVISEAWDGSRNPVFDLTGKKPAWQRAKVYTSTIYNKMLANVIQGGIAPDAAVTD
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AAQAARALLKFA
HHHHHHHHHHCC
>Mature Secondary Structure
MNITRARFLKSTIGASLALSQPLRALAAPTQLKGTVTYLTYESLPTTKKVIGDLFAEIEA
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
ANPGLKIKPLFTSPEAVRKQVSSMLQSRTAPDIVNLDIEDALLYSRGGLLAPINPLTAVL
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCCCHHHHHC
PDAWRVRPDGKNDFFVPNGIKFTYSWYRADLFEKAGLQPPKTWDEYERAAAKLTGSGQYG
CCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEE
CIINSNTSGDNPVSALYSYAMSNGVTFFDDEGNLLFDQGENRKRLVETLAFLQRMSKYSP
EEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
STTNFAWADVMNSYASGRIAMADYIGARFFAVVSQNNAEIAKVTKPFVQPYGMAAANRLS
CCCCCHHHHHHHHHCCCCEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCHHHHHHCC
AEGYMVFKDSQNVESAKAIIHYLREGQRYYEFLWSIPMHVLPVAKKDFEGPYQANEYVKS
CCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHCHHHCCCCCCCHHHHHHC
KPEISRVISEAWDGSRNPVFDLTGKKPAWQRAKVYTSTIYNKMLANVIQGGIAPDAAVTD
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AAQAARALLKFA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA