| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611413
Identifier: 121611413
GI number: 121611413
Start: 4982559
End: 4983563
Strand: Direct
Name: 121611413
Synonym: Veis_4502
Alternate gene names: NA
Gene position: 4982559-4983563 (Clockwise)
Preceding gene: 121611411
Following gene: 121611416
Centisome position: 89.51
GC content: 56.62
Gene sequence:
>1005_bases ATGCCGTTTGAGATCAGGCCCTGGGAAGCGATTGCGGAAAACTACGGATGCACAATTCTGCTCGGCAACGGTGCCAGCAT CTCCGTCAGTCCGACCTTCTCCTACGGCTCGCTGCTGCAACATGCCGCCGAGTACAACCTGCTCCCCGTGGATGCTCAGC GGTTGTTCAAGTTCTTTCGGACCAACGACTTCGAGCTGGTTCTTCGTATCGTCTGGCAGGCATCAAACGTCAATCGTTTA CTACAAATTCCGGACGAGCGGACCCATGCCGCCTACGTGGGTCTTAGGGACTGCCTCATCCAAACAGTCCGCGACATTCA TCCGGAGCATGGTGCGGTAAGCGCCCACCTGCCGAGCATCTATCAATTCCTGAAGCGGTTCAGAACCGTCATCTCGCTCA ACTACGACCTGGTGGTGTACTGGGCTATGACCTACGGGTTGGCCATCGACGACCAGCATGCGTTCAAGGACTGCTTTGTG GGAGGTGGCACCTTCAACGATGACTGGCAGCGATTCAGGCAGCCGATCCGGAGAGAACGTTCAACCTCGCTGGTGTTCTA TGCGCATGGCAGTCTGGTGTTGTGCCGAAACCTGGTCGAGCAGGAGCGCAAGATCCACAACCTTCAGGACGGGCTGCTGG AGGCGGTCCTGCAGCGCTGGCAAAACGGAGAGGTCGTGCCTTTGTTCGTGAGCGAGGGAACGTGGCGGCAGAAAGTTACT TCCATCCAAAACAGCTACTACCTCTCCACCGTATACAGAGAGGTGCTGAAATCGCAGCGGGACACGCTGGTGGTTTATGG CTGGGGCTTCGCCAAGCAAGACATTCACCTACTGCAACGAATGAAAGACACCGGCATCAATCGTGTGGCGGTGTCAGTAT TTGGAGGGGGTCAGGCGTACTGCAACCGGGTCTTCCAGACGATCCGCGACGAATTGGGAGCACATGTCAAGGTGGAGTTC TTCGACAGCGAGAGCCCCGGTTGCTGGATTCATCCAGCTCACTAA
Upstream 100 bases:
>100_bases TTCCTTCGCGCTCAATATGTGCTGGCTCCTGATCAAGAACCATCTCGCGCGAATTCCACAGCTATGAACCTCGCGACTTA AATGCACAAGGACCAACAAC
Downstream 100 bases:
>100_bases ATGGTGGAAAACCTAGGAGCCGCGCTGTGTCATCAATGCTAGACAGGTTCTACGAGCGTTCCGCCCATCTGAACGTATTG CTGAACAGCAATCCTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPFEIRPWEAIAENYGCTILLGNGASISVSPTFSYGSLLQHAAEYNLLPVDAQRLFKFFRTNDFELVLRIVWQASNVNRL LQIPDERTHAAYVGLRDCLIQTVRDIHPEHGAVSAHLPSIYQFLKRFRTVISLNYDLVVYWAMTYGLAIDDQHAFKDCFV GGGTFNDDWQRFRQPIRRERSTSLVFYAHGSLVLCRNLVEQERKIHNLQDGLLEAVLQRWQNGEVVPLFVSEGTWRQKVT SIQNSYYLSTVYREVLKSQRDTLVVYGWGFAKQDIHLLQRMKDTGINRVAVSVFGGGQAYCNRVFQTIRDELGAHVKVEF FDSESPGCWIHPAH
Sequences:
>Translated_334_residues MPFEIRPWEAIAENYGCTILLGNGASISVSPTFSYGSLLQHAAEYNLLPVDAQRLFKFFRTNDFELVLRIVWQASNVNRL LQIPDERTHAAYVGLRDCLIQTVRDIHPEHGAVSAHLPSIYQFLKRFRTVISLNYDLVVYWAMTYGLAIDDQHAFKDCFV GGGTFNDDWQRFRQPIRRERSTSLVFYAHGSLVLCRNLVEQERKIHNLQDGLLEAVLQRWQNGEVVPLFVSEGTWRQKVT SIQNSYYLSTVYREVLKSQRDTLVVYGWGFAKQDIHLLQRMKDTGINRVAVSVFGGGQAYCNRVFQTIRDELGAHVKVEF FDSESPGCWIHPAH >Mature_333_residues PFEIRPWEAIAENYGCTILLGNGASISVSPTFSYGSLLQHAAEYNLLPVDAQRLFKFFRTNDFELVLRIVWQASNVNRLL QIPDERTHAAYVGLRDCLIQTVRDIHPEHGAVSAHLPSIYQFLKRFRTVISLNYDLVVYWAMTYGLAIDDQHAFKDCFVG GGTFNDDWQRFRQPIRRERSTSLVFYAHGSLVLCRNLVEQERKIHNLQDGLLEAVLQRWQNGEVVPLFVSEGTWRQKVTS IQNSYYLSTVYREVLKSQRDTLVVYGWGFAKQDIHLLQRMKDTGINRVAVSVFGGGQAYCNRVFQTIRDELGAHVKVEFF DSESPGCWIHPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38436; Mature: 38305
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFEIRPWEAIAENYGCTILLGNGASISVSPTFSYGSLLQHAAEYNLLPVDAQRLFKFFR CCCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHC TNDFELVLRIVWQASNVNRLLQIPDERTHAAYVGLRDCLIQTVRDIHPEHGAVSAHLPSI CCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YQFLKRFRTVISLNYDLVVYWAMTYGLAIDDQHAFKDCFVGGGTFNDDWQRFRQPIRRER HHHHHHHHHHHHCCCHHEEEEEHHHCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCC STSLVFYAHGSLVLCRNLVEQERKIHNLQDGLLEAVLQRWQNGEVVPLFVSEGTWRQKVT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH SIQNSYYLSTVYREVLKSQRDTLVVYGWGFAKQDIHLLQRMKDTGINRVAVSVFGGGQAY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH CNRVFQTIRDELGAHVKVEFFDSESPGCWIHPAH HHHHHHHHHHHCCCEEEEEEEECCCCCEEEECCC >Mature Secondary Structure PFEIRPWEAIAENYGCTILLGNGASISVSPTFSYGSLLQHAAEYNLLPVDAQRLFKFFR CCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHC TNDFELVLRIVWQASNVNRLLQIPDERTHAAYVGLRDCLIQTVRDIHPEHGAVSAHLPSI CCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YQFLKRFRTVISLNYDLVVYWAMTYGLAIDDQHAFKDCFVGGGTFNDDWQRFRQPIRRER HHHHHHHHHHHHCCCHHEEEEEHHHCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCC STSLVFYAHGSLVLCRNLVEQERKIHNLQDGLLEAVLQRWQNGEVVPLFVSEGTWRQKVT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH SIQNSYYLSTVYREVLKSQRDTLVVYGWGFAKQDIHLLQRMKDTGINRVAVSVFGGGQAY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH CNRVFQTIRDELGAHVKVEFFDSESPGCWIHPAH HHHHHHHHHHHCCCEEEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA