| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121611358
Identifier: 121611358
GI number: 121611358
Start: 4910706
End: 4910987
Strand: Direct
Name: 121611358
Synonym: Veis_4444
Alternate gene names: NA
Gene position: 4910706-4910987 (Clockwise)
Preceding gene: 121611357
Following gene: 121611362
Centisome position: 88.21
GC content: 65.25
Gene sequence:
>282_bases TTGCGCTGCGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCGGTGACACGACACTAGCCTCTTGCTCGGCAAGCCC TGAACCCCCTCCTCCCGCATGCGCCGCTTCAGCCGCTCGATCGGCCGAACTCCTATCCCCGACCTTCCAGCAGCGCTCGA CGGTTCCGACTGACCCTCTGTCACCTGCGCCATCGCCTGACTGCGCGGCACTTTCTTATCTGGTGGGTCACCCCGTGGGG CCGCATGGACTCCATCCCGGGGTGCGCCGACATGTTGGTTGA
Upstream 100 bases:
>100_bases TCGCGTCACCGATCATCTGTCGGTCCGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACAGCTCGG TATGGGCTGCGCGATGCGCC
Downstream 100 bases:
>100_bases GGGTACGACGATTCCGACCTTCATTCGGACAGGGCAATGCCTGGGCGAGAAAGCGTGCCGTAGACAGAAATCTTTGATCT CTTTGCTCTTTGTGACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MRCAPMAARSLRHLIGDTTLASCSASPEPPPPACAASAARSAELLSPTFQQRSTVPTDPLSPAPSPDCAALSYLVGHPVG PHGLHPGVRRHVG
Sequences:
>Translated_93_residues MRCAPMAARSLRHLIGDTTLASCSASPEPPPPACAASAARSAELLSPTFQQRSTVPTDPLSPAPSPDCAALSYLVGHPVG PHGLHPGVRRHVG >Mature_93_residues MRCAPMAARSLRHLIGDTTLASCSASPEPPPPACAASAARSAELLSPTFQQRSTVPTDPLSPAPSPDCAALSYLVGHPVG PHGLHPGVRRHVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9527; Mature: 9527
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCAPMAARSLRHLIGDTTLASCSASPEPPPPACAASAARSAELLSPTFQQRSTVPTDPL CCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCC SPAPSPDCAALSYLVGHPVGPHGLHPGVRRHVG CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MRCAPMAARSLRHLIGDTTLASCSASPEPPPPACAASAARSAELLSPTFQQRSTVPTDPL CCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCC SPAPSPDCAALSYLVGHPVGPHGLHPGVRRHVG CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA