Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611298

Identifier: 121611298

GI number: 121611298

Start: 4831471

End: 4831914

Strand: Direct

Name: 121611298

Synonym: Veis_4384

Alternate gene names: NA

Gene position: 4831471-4831914 (Clockwise)

Preceding gene: 121611297

Following gene: 121611299

Centisome position: 86.79

GC content: 60.14

Gene sequence:

>444_bases
ATGAGTACTACACCAGAGAACAACGCGAACGCGGTGATACCGCTTGCGCGCGCGGACCTCGAGGCCGTGATTCAGAAGAC
ACCATTTGCGCTATTGCTGGGCGCGAAGCTGGAGGAGTATGGCGATGGCGTCGCCAACCTCTCGGTGGCGTTGCGGCCTG
ATCTGACCATGCACATGGGCTTCGCGCATGGCGCGGTGGTTGGGTTCCTGGCTGACAGTGCCTGTGCGTGGGCCGCAGCG
TCTACGGTCGGCAACGTGGTTACCTCGGAATACAAGCTCAACCTAATTGCTCCCGGAATCGGCGAGCAGTTGCGTGCCGA
AGGTCGGGTGCTGAAAGCGGCTGGTCGCAACTTGGTGTGCATGGCCAATGTGTACGCCGTGAACCAGGGCAAGTCCACCC
TAGTCGCAGTAGCGTTGGCCACCATCGCACGCTTCAACAAATAA

Upstream 100 bases:

>100_bases
GCAAAATCCGACGCAAGGAGACACAGCACCGCTTTGTCGCGGATGCGCTTGAGGAAGTCAGCGCCACGGCGCACAATCAG
ACAGTAACAACGGAGGCATC

Downstream 100 bases:

>100_bases
GGTGCTGCCCCGTGCGGCACCGCTGGTGATGGACGGAGGCATGGACCGCGACGGCACCAGAATCGGCTTTGATCTGGAGC
TGACACGCGCCGTCAACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI; Protein Possibly Involved In Aromatic Compounds Catabolism; Phenylacetic Acid Degradation Protein PaaD

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAA
STVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK

Sequences:

>Translated_147_residues
MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAA
STVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK
>Mature_146_residues
STTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAAS
TVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15281; Mature: 15150

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMG
CCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEEEEECCCCEEEEC
FAHGAVVGFLADSACAWAAASTVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVC
CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEECCCCCEEE
MANVYAVNQGKSTLVAVALATIARFNK
EEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMG
CCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEEEEECCCCEEEEC
FAHGAVVGFLADSACAWAAASTVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVC
CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEECCCCCEEE
MANVYAVNQGKSTLVAVALATIARFNK
EEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA