| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is hisF [H]
Identifier: 121611299
GI number: 121611299
Start: 4831955
End: 4832194
Strand: Direct
Name: hisF [H]
Synonym: Veis_4385
Alternate gene names: 121611299
Gene position: 4831955-4832194 (Clockwise)
Preceding gene: 121611298
Following gene: 121611302
Centisome position: 86.8
GC content: 67.5
Gene sequence:
>240_bases ATGGACCGCGACGGCACCAGAATCGGCTTTGATCTGGAGCTGACACGCGCCGTCAACGACGCCGTGGGCCTGCCGGTGAT CGCCTCGGGCGGCGTGGGCACACTCGATCATCTGGCCGATGGCATACAGACCGGCGGCGCCGACGCCGTGCTGGCCGCCA GCATCTTCCATTACGGTGAATACACGGTGGGCCAGGCCAAGCAGCATCTGGCCGGACGCGGCATTGCGGTGCGGCGCTGA
Upstream 100 bases:
>100_bases CAGGGCAAGTCCACCCTAGTCGCAGTAGCGTTGGCCACCATCGCACGCTTCAACAAATAAGGTGCTGCCCCGTGCGGCAC CGCTGGTGATGGACGGAGGC
Downstream 100 bases:
>100_bases TGCGGCGCAATGGCCGCCCCGGGCTGGCGCCCGGGGTCAATGGGCCGGCGCCGGCAGGCATTTGAATGCCAGCGCCCCCA AGACCAGCATCAGCGCAATG
Product: imidazoleglycerol phosphate synthase, cyclase subunit
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase cyclase subunit; IGP synthase subunit hisF; ImGP synthase subunit hisF; IGPS subunit hisF [H]
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MDRDGTRIGFDLELTRAVNDAVGLPVIASGGVGTLDHLADGIQTGGADAVLAASIFHYGEYTVGQAKQHLAGRGIAVRR
Sequences:
>Translated_79_residues MDRDGTRIGFDLELTRAVNDAVGLPVIASGGVGTLDHLADGIQTGGADAVLAASIFHYGEYTVGQAKQHLAGRGIAVRR >Mature_79_residues MDRDGTRIGFDLELTRAVNDAVGLPVIASGGVGTLDHLADGIQTGGADAVLAASIFHYGEYTVGQAKQHLAGRGIAVRR
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the hisH subunit [H]
COG id: COG0107
COG function: function code E; Imidazoleglycerol-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI1788336, Length=78, Percent_Identity=39.7435897435897, Blast_Score=70, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319725, Length=78, Percent_Identity=46.1538461538462, Blast_Score=76, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004651 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 4.1.3.- [C]
Molecular weight: Translated: 8161; Mature: 8161
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRDGTRIGFDLELTRAVNDAVGLPVIASGGVGTLDHLADGIQTGGADAVLAASIFHYGE CCCCCCEEECEEEHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCC YTVGQAKQHLAGRGIAVRR CCHHHHHHHHCCCCEECCC >Mature Secondary Structure MDRDGTRIGFDLELTRAVNDAVGLPVIASGGVGTLDHLADGIQTGGADAVLAASIFHYGE CCCCCCEEECEEEHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCC YTVGQAKQHLAGRGIAVRR CCHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Lyases; Carbon-Nitrogen Lyases; Amidine-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA