| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is hisH [H]
Identifier: 121611290
GI number: 121611290
Start: 4826951
End: 4827619
Strand: Direct
Name: hisH [H]
Synonym: Veis_4376
Alternate gene names: 121611290
Gene position: 4826951-4827619 (Clockwise)
Preceding gene: 121611289
Following gene: 121611291
Centisome position: 86.71
GC content: 66.82
Gene sequence:
>669_bases ATGAATACGCAAGCAAAAACCGTCGCCGTGGTGGACTACGGCATGGGCAACCTGCGCTCGGTCGCGCAGGCCGTGCAGGC CGCCGCCCAGGGCACGGGCTGGACCGTCGTGGTCACGCAGCGCCCGGAGGTCGTGCGCGCCGCGCAGCGCGTCGTGCTGC CCGGCCAGGGCGCCATGCCCGACTGCATGCATGAATTGCGTGCCTCGGGCCTGCAACCGGCGGTGCTCGAAGCCGCCGCC AGCAAGCCCCTGTTCGGCATCTGCGTGGGCATGCAGATGCTGCTCGAGCACAGTGCCGAGGGCGACACGCCCGGCCTCGG GTTGATCCGCGGCGTGGTGCGCCGATTCGATCTGAGCGGCCAAACCCAGCCTGACGGCAGCCGCTACAAGGTGCCCCAGA TGGGTTGGAACCAGGTGCGCCAGATGGCGCACGGCGGCGCCGTCCACCCCTTGTGGGCGGCGGTGCCCGACGACAGCCAT TTCTACTTCGTGCACAGCTTGTATGCCATCCCGCAATCTGCGGCCCATTGCGCCGGGCAGGCCGACTATGGCGGCTGGTT TGCCGCCGCGATTGCACGCGATAATATTTTTGCCACGCAATTTCACCCGGAAAAGAGTGCCGAGCACGGCCTGACTCTGT ACCGCAATTTTCTGCACTGGAACCCCTGA
Upstream 100 bases:
>100_bases GCATCGCCTCGACCAAAGGCTCTTTGTAAAGTGCTGTGAACCGTGTTGATTTCCGTGATTGAATCCGGGCACTGAGCGCT TTCGACACACGCTGGCTGCC
Downstream 100 bases:
>100_bases CCCTTTCAACCTCGTTCGGGCCGAGTTCCGTCTCGCCCTTTTCCACCCGAACCCACCATGCTGCTCATCCCCGCCATCGA TCTCAAGGACGGTCATTGCG
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNTQAKTVAVVDYGMGNLRSVAQAVQAAAQGTGWTVVVTQRPEVVRAAQRVVLPGQGAMPDCMHELRASGLQPAVLEAAA SKPLFGICVGMQMLLEHSAEGDTPGLGLIRGVVRRFDLSGQTQPDGSRYKVPQMGWNQVRQMAHGGAVHPLWAAVPDDSH FYFVHSLYAIPQSAAHCAGQADYGGWFAAAIARDNIFATQFHPEKSAEHGLTLYRNFLHWNP
Sequences:
>Translated_222_residues MNTQAKTVAVVDYGMGNLRSVAQAVQAAAQGTGWTVVVTQRPEVVRAAQRVVLPGQGAMPDCMHELRASGLQPAVLEAAA SKPLFGICVGMQMLLEHSAEGDTPGLGLIRGVVRRFDLSGQTQPDGSRYKVPQMGWNQVRQMAHGGAVHPLWAAVPDDSH FYFVHSLYAIPQSAAHCAGQADYGGWFAAAIARDNIFATQFHPEKSAEHGLTLYRNFLHWNP >Mature_222_residues MNTQAKTVAVVDYGMGNLRSVAQAVQAAAQGTGWTVVVTQRPEVVRAAQRVVLPGQGAMPDCMHELRASGLQPAVLEAAA SKPLFGICVGMQMLLEHSAEGDTPGLGLIRGVVRRFDLSGQTQPDGSRYKVPQMGWNQVRQMAHGGAVHPLWAAVPDDSH FYFVHSLYAIPQSAAHCAGQADYGGWFAAAIARDNIFATQFHPEKSAEHGLTLYRNFLHWNP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=214, Percent_Identity=35.0467289719626, Blast_Score=111, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319725, Length=227, Percent_Identity=33.0396475770925, Blast_Score=105, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 23986; Mature: 23986
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQAKTVAVVDYGMGNLRSVAQAVQAAAQGTGWTVVVTQRPEVVRAAQRVVLPGQGAMP CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHEECCCCCCCH DCMHELRASGLQPAVLEAAASKPLFGICVGMQMLLEHSAEGDTPGLGLIRGVVRRFDLSG HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC QTQPDGSRYKVPQMGWNQVRQMAHGGAVHPLWAAVPDDSHFYFVHSLYAIPQSAAHCAGQ CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHCCHHHHHHCCC ADYGGWFAAAIARDNIFATQFHPEKSAEHGLTLYRNFLHWNP CCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTQAKTVAVVDYGMGNLRSVAQAVQAAAQGTGWTVVVTQRPEVVRAAQRVVLPGQGAMP CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHEECCCCCCCH DCMHELRASGLQPAVLEAAASKPLFGICVGMQMLLEHSAEGDTPGLGLIRGVVRRFDLSG HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC QTQPDGSRYKVPQMGWNQVRQMAHGGAVHPLWAAVPDDSHFYFVHSLYAIPQSAAHCAGQ CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHCCHHHHHHCCC ADYGGWFAAAIARDNIFATQFHPEKSAEHGLTLYRNFLHWNP CCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA