| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is hisB
Identifier: 121611289
GI number: 121611289
Start: 4826247
End: 4826879
Strand: Direct
Name: hisB
Synonym: Veis_4375
Alternate gene names: 121611289
Gene position: 4826247-4826879 (Clockwise)
Preceding gene: 121611288
Following gene: 121611290
Centisome position: 86.7
GC content: 67.61
Gene sequence:
>633_bases ATGACCTCCTCCGCCCTCGTGCCCTCGGGCCTGCCCGGTTCGCTCGACCGCATCGCCGAGGTCAGCCGCAACACCGCCGA GACCCGCGTCAGCGTGCGCGTCAACCTCGACGGCACCGGCCAGGCCAAGCTGCGCACCGGCATCGGTTTCTTTGACCATA TGCTCGATCAAACCGCCCGCCACGGGCTGATCGACCTGGATGTCGACTGCGCCGGCGACCTGCACATCGACGGCCACCAC ACGGTCGAGGACGTGGGCATCACGCTGGGCCAGGCGCTGGCGCGGGCCATGGGCGACAAAAAAGGCATCTGCCGCTACGC CCATGCCTATGTGCCGCTGGACGAGGCGCTCTCGCGCGTGGTGGTCGATATCTCGGGCCGCCCGGGGCTGCACCTGCATA TCCCGTTCAGCGCCGGCCGCATTGGCGACTTCGACACCCAACTGACCCACGAATTCTTCCAGGGCTTCGTGAACCACGCG GGCATCACGCTGCACATCGACAACCTCAAGGGCGTCAACGCGCACCACCAGTGCGAGTCCGTGTTCAAGGCCTTTGCCCG CGCGCTGCGCGCGGCGCTCGAACGCGACCCCCGCTCGGCGGGCCGCATCGCCTCGACCAAAGGCTCTTTGTAA
Upstream 100 bases:
>100_bases ACGTTTCTACAATGCACCCCTTGCTGAGCAACTGCCTGCGCCTGACGGTCGGCAGTGCCGACGACAACGCACAAATGCTG GCTGCACTCCAGGCCTCTTC
Downstream 100 bases:
>100_bases AGTGCTGTGAACCGTGTTGATTTCCGTGATTGAATCCGGGCACTGAGCGCTTTCGACACACGCTGGCTGCCATGAATACG CAAGCAAAAACCGTCGCCGT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTSSALVPSGLPGSLDRIAEVSRNTAETRVSVRVNLDGTGQAKLRTGIGFFDHMLDQTARHGLIDLDVDCAGDLHIDGHH TVEDVGITLGQALARAMGDKKGICRYAHAYVPLDEALSRVVVDISGRPGLHLHIPFSAGRIGDFDTQLTHEFFQGFVNHA GITLHIDNLKGVNAHHQCESVFKAFARALRAALERDPRSAGRIASTKGSL
Sequences:
>Translated_210_residues MTSSALVPSGLPGSLDRIAEVSRNTAETRVSVRVNLDGTGQAKLRTGIGFFDHMLDQTARHGLIDLDVDCAGDLHIDGHH TVEDVGITLGQALARAMGDKKGICRYAHAYVPLDEALSRVVVDISGRPGLHLHIPFSAGRIGDFDTQLTHEFFQGFVNHA GITLHIDNLKGVNAHHQCESVFKAFARALRAALERDPRSAGRIASTKGSL >Mature_209_residues TSSALVPSGLPGSLDRIAEVSRNTAETRVSVRVNLDGTGQAKLRTGIGFFDHMLDQTARHGLIDLDVDCAGDLHIDGHHT VEDVGITLGQALARAMGDKKGICRYAHAYVPLDEALSRVVVDISGRPGLHLHIPFSAGRIGDFDTQLTHEFFQGFVNHAG ITLHIDNLKGVNAHHQCESVFKAFARALRAALERDPRSAGRIASTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=195, Percent_Identity=48.7179487179487, Blast_Score=188, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=219, Percent_Identity=39.2694063926941, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_VEREI (A1WR21)
Other databases:
- EMBL: CP000542 - RefSeq: YP_999096.1 - ProteinModelPortal: A1WR21 - SMR: A1WR21 - STRING: A1WR21 - GeneID: 4691905 - GenomeReviews: CP000542_GR - KEGG: vei:Veis_4375 - NMPDR: fig|391735.5.peg.4006 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: A1WR21 - BioCyc: VEIS391735:VEIS_4375-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22591; Mature: 22460
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSALVPSGLPGSLDRIAEVSRNTAETRVSVRVNLDGTGQAKLRTGIGFFDHMLDQTAR CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH HGLIDLDVDCAGDLHIDGHHTVEDVGITLGQALARAMGDKKGICRYAHAYVPLDEALSRV CCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH VVDISGRPGLHLHIPFSAGRIGDFDTQLTHEFFQGFVNHAGITLHIDNLKGVNAHHQCES EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH VFKAFARALRAALERDPRSAGRIASTKGSL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TSSALVPSGLPGSLDRIAEVSRNTAETRVSVRVNLDGTGQAKLRTGIGFFDHMLDQTAR CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH HGLIDLDVDCAGDLHIDGHHTVEDVGITLGQALARAMGDKKGICRYAHAYVPLDEALSRV CCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH VVDISGRPGLHLHIPFSAGRIGDFDTQLTHEFFQGFVNHAGITLHIDNLKGVNAHHQCES EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH VFKAFARALRAALERDPRSAGRIASTKGSL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA