| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611259
Identifier: 121611259
GI number: 121611259
Start: 4788807
End: 4789592
Strand: Direct
Name: 121611259
Synonym: Veis_4345
Alternate gene names: NA
Gene position: 4788807-4789592 (Clockwise)
Preceding gene: 121611258
Following gene: 121611260
Centisome position: 86.03
GC content: 67.05
Gene sequence:
>786_bases ATGATGACACCACAAACCCGCCGCTTCCCCTTGCGCACCGTCCTGACCATTGCCACCGTCGCCACGTTGGCGGCATGTGG CGGCGGCGGTGGTGGCGGCGATGGCGGCAGCCCCAGCACCCCGGCGACCACCATCGACCCGACGCAATTCAAAGGCCGCT GGGCCACCGCTGCCGCTGTGACGCCCGTGATGACCGCCGTGGTTCTGCCCGATGCCTCGGGCACGACGGCCAGCGCCTGG TTGCTGGCCAATGATGCGAGCCGGCTGGTCAAACTGGTGCTGTTCAGCGACAGCAGCGCCAACGGCACGTCTTACACGCT GGCGCCGACGAATACCGATGGCCAGTCCGTGCTCGGCACGGTGACGGGCACGCTGACGAGCAGCCCCAAGCGCATGTCTC TGACCGGTGTGAGCAGCGCGGCTTTGGCGTTCGACCAAAGCGACGCGCTGGCCAAGGCGGCGGAGCAGGCCGACGCGGCC AAAACCTGGGAGTCGATCGCCGGCGGCAATGCCCGCACCACGACCTGGACGGTGGCCAGCGACGGCGCCATCTCCGGCAG CTCGACCACCGGTTGCAGCTTTACCGGCAAACTGACCGCGATGAGCAGCAGCAATGCCTTCAGCGCGCAGATCGCTGAAA GCTGCTCCGACGGCGTCACCACCAACTTCAGCGGCATCGCCACGGTGGATGCGCCCAAAACCCGCCTGACCGTGACGGCG ATCACCGCCGACACCAAGAAGGGCGTGGCGATTTTCTTTGGCGCCAAAGCAGCCGCAACGCAGTAA
Upstream 100 bases:
>100_bases TGCTGGCGCATGAAACCCTGCTGGAAAACAACGGATAATCCCTTGTCCACCGTTTGACGATTTCCTTGGCAATTTTTTTC AACCCCATCACGGAGAAAAC
Downstream 100 bases:
>100_bases TGCGCCGCTGCGCTGCCCCCTGCTGGCGGGGGGGCAGCGCAGACCGGAAACCCCTCCTGGCGGGGGGTGGCAAGCACCGC GCATGGACATCGCCTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA ITADTKKGVAIFFGAKAAATQ
Sequences:
>Translated_261_residues MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA ITADTKKGVAIFFGAKAAATQ >Mature_261_residues MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAVTPVMTAVVLPDASGTTASAW LLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGTVTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAA KTWESIAGGNARTTTWTVASDGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA ITADTKKGVAIFFGAKAAATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25981; Mature: 25981
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH TPVMTAVVLPDASGTTASAWLLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGT HHHEEEEEECCCCCCCEEEEEEECCHHHEEEEEEEECCCCCCCEEEEECCCCCCCEEEEE VTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAAKTWESIAGGNARTTTWTVAS EEEEECCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC DGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEE ITADTKKGVAIFFGAKAAATQ EECCCCCCEEEEEECCCCCCC >Mature Secondary Structure MMTPQTRRFPLRTVLTIATVATLAACGGGGGGGDGGSPSTPATTIDPTQFKGRWATAAAV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH TPVMTAVVLPDASGTTASAWLLANDASRLVKLVLFSDSSANGTSYTLAPTNTDGQSVLGT HHHEEEEEECCCCCCCEEEEEEECCHHHEEEEEEEECCCCCCCEEEEECCCCCCCEEEEE VTGTLTSSPKRMSLTGVSSAALAFDQSDALAKAAEQADAAKTWESIAGGNARTTTWTVAS EEEEECCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC DGAISGSSTTGCSFTGKLTAMSSSNAFSAQIAESCSDGVTTNFSGIATVDAPKTRLTVTA CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEE ITADTKKGVAIFFGAKAAATQ EECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA