Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611256

Identifier: 121611256

GI number: 121611256

Start: 4783376

End: 4785748

Strand: Direct

Name: 121611256

Synonym: Veis_4342

Alternate gene names: NA

Gene position: 4783376-4785748 (Clockwise)

Preceding gene: 121611255

Following gene: 121611258

Centisome position: 85.93

GC content: 65.02

Gene sequence:

>2373_bases
ATGACCGAAGCCCGATCAACCCCTCTTCATCCCACCAATCCATTCTCATTCCATCGAAAGGAACACACCGTGGCCCACAG
CATCACCATGGATAACTCCGCCCTCAAAGCCGGCGAAACGGCGAGAGTCACCGTCTTCATCGACAACACTTACAACCCGG
TATTGCGAGGCACAGGGACGCGCCTTCGGCTCGATGGCCTGGACTTTTCGCAGGCCCCTGGCACTGTGCTGTATGTGACC
AGCGAGACGGTCGCCGGGGGTGACAATTACTACTTCGACCTCACCCCCACCCCGAACACGCAGAACGCCGGCGGCACCAT
CCGCATGAGCATTCCCGCCTCAGGTGACCGCCCTGCCATCAACCTGAGCAAGACCTACACCGCCGACACCCAGCGGCCCA
CTCTCGCCACCACCTACCGGTTCTCGCCCGACTGCGACTTGACCGCCGGCGATACAGCCACCATCACCTTCAGCTTTTCC
GAGCCGGTCACCGGCTTCACCATCGATGACCTGACGATACCGACGGGCAAGGGCACGCTGAGCAACCTGCGCACCACCGA
CGGCGGCACCACTTGGACGGTAGACCTGAGGGCGCCGGCCACCTTGCCGGCCAACACCCCTGAGGATGTCCAGATCACCG
TCAACATGGCCGGCATCACCGATGCTGCGGGCAACGCGGGCACGGGAAGCGCAACCCTTGCCACCTACAGCCTCGGCAAC
AAGCCGCCCAGCATCGTCTCTGTGGTCGGCCCCACCTCCATCGTCTTGGACGACACCGACGTCACCATTACCTTCACCTT
CAGCGAGGCAGTCACCGGCTTCACGTTGGCCAACATCAATTTGGACAACTCCAGTGCCTCTCCCTACATCACCTACAGCC
CGAAAGCGCCGGTCAGCGCAGATGGTGGCCGCACCTGGACCATCACCTACCGTGCCGCTCCGCGCACCACGGATTCCACC
AACACCGTCAGCATCCGCAACCTCGATGGCGTGCGTGACCTCGCAGGCAACGCCGCAGTGCCTAACTCCAGCGCCAGCAC
CGACAACTACGAGGTCGATGCCGAGGATCCCCATCCCACCAGCGCTACGTTTGACAAAGCGCGCCTCACCGCTGGCGAAA
CCGCCACCGTCACCATCACTTTCAACGAGAGCGTCGTCAGTGGCCTCACCGAAGCTGCCATTCAGATCGCCAACGGTTCT
GTGAGCAACCTGAGGTCGGTCGCCGGCTCCGACGGCAGAGTCTGGACAGTCACCTTCACACCCACGGCCAACCTGGCGCG
CACCAGCAGCTCGATCACAGTAAATGTGGACGGCCTCAGAGATCGCGCCGGCAACACCAGCTCTGGTTCCCAGCCGTTCT
ACGACTCCACCATCGTCATCGACACCAAGGTCTTTGTCGTCAACGCCGCCACGGTGAACGGCAAGCAGTTGGTATTGCGC
TACAGCGATGAAACCATGCTGGACCCGGACCAGACCCACAACGCGCCCAACGATGCCTTCGTGGTGCTGGTCGATGGCGT
GCGCAACAACGTCACCGGCGTGGCCGTGGATGCAGCGGCCAAGACCGTCACGCTGACGCTTGAGGGCGCGGTGAGCAAGG
ACCAGCAGGTGACCGTCGCCTACAACGACCCCAGCACCGGCAACGACCCGCAAGCGGTGCAGGAGGCCGGCACCGGCACC
ACCAGCGGCCACGACGCGGCCAGTTTCGCGGCCAAGCCGGTGACCAACCTCACCCGGCCCCCGGTCGCACCCGCCACACC
GGAGGCGCCGGATGCGCCGGACTCCGACCGCGACGGTCTGTCCAACAACCGGGAGGACCAGGCCCCCGGCCTGCTGCGCC
CCGACGGCTCGGCCGGCCTGGCTGGCGACGGCAACGGCGATGGCGTCAAAGACAGCCTGCAGGTCGCCGTCGCTTCGACC
CGCGACCTGACCCTGGTGGCCGGCAGCCGGGACGGCAAACTGATCCCCGACAGCAACGCGCGCATCACCGAACTGGTGCG
CAGCGATGCCCCGGCCAAGCTGCCCAAGGGCATGGAGATGCCGCTCGGCCTGACCTCATTCAAGGTATCGCTGGCCGAAG
GCCGCAGCACCGAGAGCTTCAGCCTGTACGTAGATTCGGCGCTCGGCGCCAACGGCTACTGGCTCAAGAACGGCGCCGGC
ACCTGGGTGAACCTGGCCAGCGAACCCTACGGCGGCAAAGTGAGCAGCGAAGGCGGGCGCACGCGGCTGGACTTTCAGAT
CCAGGACGGCGGCGAGTACGACGCCGACGGCCAGGCCGATGGCAGCATCACCGCCCCCGGCGCCGTGGCGAAGATGCCGC
TGTCCATCCTCGGGCAGACGCCCCAGGTCGATTCGCATGGGTACTGGTTCTAA

Upstream 100 bases:

>100_bases
CAATCTGTCAGAGATATCGCCCGCCACTGGGCAGACGCAGCCCCGCCAGACAAGGTACGGCACTGACACACACTTGCGCT
GTGGCACTGAGCACAAGCGG

Downstream 100 bases:

>100_bases
CGATTCTGCGGGCGCCAAATGCCCAGGCATGACGACGACCTGCTGGAAAGTAGGGGGGGGGTGTTCAGCACGCAGGCGTT
GGCCCGTGGAACGCGGCTGG

Product: outer membrane protein

Products: NA

Alternate protein names: Pyrrolo-Quinoline Quinone; Glycosyl Hydrolase BNR Repeat; Flagellar Hook-Length Control Protein FliK; S-Layer Domain Protein; BNR Repeat-Containing Glycosyl Hydrolase; RTX xin; Cadherin Domain-Containing Protein; Cadherin Domain Protein; Outer Membrane Adhesin Like Protein; Fibronectin Type III Domain Protein

Number of amino acids: Translated: 790; Mature: 789

Protein sequence:

>790_residues
MTEARSTPLHPTNPFSFHRKEHTVAHSITMDNSALKAGETARVTVFIDNTYNPVLRGTGTRLRLDGLDFSQAPGTVLYVT
SETVAGGDNYYFDLTPTPNTQNAGGTIRMSIPASGDRPAINLSKTYTADTQRPTLATTYRFSPDCDLTAGDTATITFSFS
EPVTGFTIDDLTIPTGKGTLSNLRTTDGGTTWTVDLRAPATLPANTPEDVQITVNMAGITDAAGNAGTGSATLATYSLGN
KPPSIVSVVGPTSIVLDDTDVTITFTFSEAVTGFTLANINLDNSSASPYITYSPKAPVSADGGRTWTITYRAAPRTTDST
NTVSIRNLDGVRDLAGNAAVPNSSASTDNYEVDAEDPHPTSATFDKARLTAGETATVTITFNESVVSGLTEAAIQIANGS
VSNLRSVAGSDGRVWTVTFTPTANLARTSSSITVNVDGLRDRAGNTSSGSQPFYDSTIVIDTKVFVVNAATVNGKQLVLR
YSDETMLDPDQTHNAPNDAFVVLVDGVRNNVTGVAVDAAAKTVTLTLEGAVSKDQQVTVAYNDPSTGNDPQAVQEAGTGT
TSGHDAASFAAKPVTNLTRPPVAPATPEAPDAPDSDRDGLSNNREDQAPGLLRPDGSAGLAGDGNGDGVKDSLQVAVAST
RDLTLVAGSRDGKLIPDSNARITELVRSDAPAKLPKGMEMPLGLTSFKVSLAEGRSTESFSLYVDSALGANGYWLKNGAG
TWVNLASEPYGGKVSSEGGRTRLDFQIQDGGEYDADGQADGSITAPGAVAKMPLSILGQTPQVDSHGYWF

Sequences:

>Translated_790_residues
MTEARSTPLHPTNPFSFHRKEHTVAHSITMDNSALKAGETARVTVFIDNTYNPVLRGTGTRLRLDGLDFSQAPGTVLYVT
SETVAGGDNYYFDLTPTPNTQNAGGTIRMSIPASGDRPAINLSKTYTADTQRPTLATTYRFSPDCDLTAGDTATITFSFS
EPVTGFTIDDLTIPTGKGTLSNLRTTDGGTTWTVDLRAPATLPANTPEDVQITVNMAGITDAAGNAGTGSATLATYSLGN
KPPSIVSVVGPTSIVLDDTDVTITFTFSEAVTGFTLANINLDNSSASPYITYSPKAPVSADGGRTWTITYRAAPRTTDST
NTVSIRNLDGVRDLAGNAAVPNSSASTDNYEVDAEDPHPTSATFDKARLTAGETATVTITFNESVVSGLTEAAIQIANGS
VSNLRSVAGSDGRVWTVTFTPTANLARTSSSITVNVDGLRDRAGNTSSGSQPFYDSTIVIDTKVFVVNAATVNGKQLVLR
YSDETMLDPDQTHNAPNDAFVVLVDGVRNNVTGVAVDAAAKTVTLTLEGAVSKDQQVTVAYNDPSTGNDPQAVQEAGTGT
TSGHDAASFAAKPVTNLTRPPVAPATPEAPDAPDSDRDGLSNNREDQAPGLLRPDGSAGLAGDGNGDGVKDSLQVAVAST
RDLTLVAGSRDGKLIPDSNARITELVRSDAPAKLPKGMEMPLGLTSFKVSLAEGRSTESFSLYVDSALGANGYWLKNGAG
TWVNLASEPYGGKVSSEGGRTRLDFQIQDGGEYDADGQADGSITAPGAVAKMPLSILGQTPQVDSHGYWF
>Mature_789_residues
TEARSTPLHPTNPFSFHRKEHTVAHSITMDNSALKAGETARVTVFIDNTYNPVLRGTGTRLRLDGLDFSQAPGTVLYVTS
ETVAGGDNYYFDLTPTPNTQNAGGTIRMSIPASGDRPAINLSKTYTADTQRPTLATTYRFSPDCDLTAGDTATITFSFSE
PVTGFTIDDLTIPTGKGTLSNLRTTDGGTTWTVDLRAPATLPANTPEDVQITVNMAGITDAAGNAGTGSATLATYSLGNK
PPSIVSVVGPTSIVLDDTDVTITFTFSEAVTGFTLANINLDNSSASPYITYSPKAPVSADGGRTWTITYRAAPRTTDSTN
TVSIRNLDGVRDLAGNAAVPNSSASTDNYEVDAEDPHPTSATFDKARLTAGETATVTITFNESVVSGLTEAAIQIANGSV
SNLRSVAGSDGRVWTVTFTPTANLARTSSSITVNVDGLRDRAGNTSSGSQPFYDSTIVIDTKVFVVNAATVNGKQLVLRY
SDETMLDPDQTHNAPNDAFVVLVDGVRNNVTGVAVDAAAKTVTLTLEGAVSKDQQVTVAYNDPSTGNDPQAVQEAGTGTT
SGHDAASFAAKPVTNLTRPPVAPATPEAPDAPDSDRDGLSNNREDQAPGLLRPDGSAGLAGDGNGDGVKDSLQVAVASTR
DLTLVAGSRDGKLIPDSNARITELVRSDAPAKLPKGMEMPLGLTSFKVSLAEGRSTESFSLYVDSALGANGYWLKNGAGT
WVNLASEPYGGKVSSEGGRTRLDFQIQDGGEYDADGQADGSITAPGAVAKMPLSILGQTPQVDSHGYWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82385; Mature: 82254

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEARSTPLHPTNPFSFHRKEHTVAHSITMDNSALKAGETARVTVFIDNTYNPVLRGTGT
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCCCEEECCCC
RLRLDGLDFSQAPGTVLYVTSETVAGGDNYYFDLTPTPNTQNAGGTIRMSIPASGDRPAI
EEEEECCCCCCCCCEEEEEECCEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEE
NLSKTYTADTQRPTLATTYRFSPDCDLTAGDTATITFSFSEPVTGFTIDDLTIPTGKGTL
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCH
SNLRTTDGGTTWTVDLRAPATLPANTPEDVQITVNMAGITDAAGNAGTGSATLATYSLGN
HHCEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCC
KPPSIVSVVGPTSIVLDDTDVTITFTFSEAVTGFTLANINLDNSSASPYITYSPKAPVSA
CCCCEEEEECCCEEEEECCCEEEEEEEHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCC
DGGRTWTITYRAAPRTTDSTNTVSIRNLDGVRDLAGNAAVPNSSASTDNYEVDAEDPHPT
CCCEEEEEEEEECCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCC
SATFDKARLTAGETATVTITFNESVVSGLTEAAIQIANGSVSNLRSVAGSDGRVWTVTFT
CCCCCCEEECCCCEEEEEEEECHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEEC
PTANLARTSSSITVNVDGLRDRAGNTSSGSQPFYDSTIVIDTKVFVVNAATVNGKQLVLR
CCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEE
YSDETMLDPDQTHNAPNDAFVVLVDGVRNNVTGVAVDAAAKTVTLTLEGAVSKDQQVTVA
ECCCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEE
YNDPSTGNDPQAVQEAGTGTTSGHDAASFAAKPVTNLTRPPVAPATPEAPDAPDSDRDGL
ECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SNNREDQAPGLLRPDGSAGLAGDGNGDGVKDSLQVAVASTRDLTLVAGSRDGKLIPDSNA
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC
RITELVRSDAPAKLPKGMEMPLGLTSFKVSLAEGRSTESFSLYVDSALGANGYWLKNGAG
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCC
TWVNLASEPYGGKVSSEGGRTRLDFQIQDGGEYDADGQADGSITAPGAVAKMPLSILGQT
CEEEECCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCHHHHCCHHHHCCC
PQVDSHGYWF
CCCCCCCCCC
>Mature Secondary Structure 
TEARSTPLHPTNPFSFHRKEHTVAHSITMDNSALKAGETARVTVFIDNTYNPVLRGTGT
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCCCEEECCCC
RLRLDGLDFSQAPGTVLYVTSETVAGGDNYYFDLTPTPNTQNAGGTIRMSIPASGDRPAI
EEEEECCCCCCCCCEEEEEECCEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEE
NLSKTYTADTQRPTLATTYRFSPDCDLTAGDTATITFSFSEPVTGFTIDDLTIPTGKGTL
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCH
SNLRTTDGGTTWTVDLRAPATLPANTPEDVQITVNMAGITDAAGNAGTGSATLATYSLGN
HHCEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCC
KPPSIVSVVGPTSIVLDDTDVTITFTFSEAVTGFTLANINLDNSSASPYITYSPKAPVSA
CCCCEEEEECCCEEEEECCCEEEEEEEHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCC
DGGRTWTITYRAAPRTTDSTNTVSIRNLDGVRDLAGNAAVPNSSASTDNYEVDAEDPHPT
CCCEEEEEEEEECCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCC
SATFDKARLTAGETATVTITFNESVVSGLTEAAIQIANGSVSNLRSVAGSDGRVWTVTFT
CCCCCCEEECCCCEEEEEEEECHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEEC
PTANLARTSSSITVNVDGLRDRAGNTSSGSQPFYDSTIVIDTKVFVVNAATVNGKQLVLR
CCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEE
YSDETMLDPDQTHNAPNDAFVVLVDGVRNNVTGVAVDAAAKTVTLTLEGAVSKDQQVTVA
ECCCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEE
YNDPSTGNDPQAVQEAGTGTTSGHDAASFAAKPVTNLTRPPVAPATPEAPDAPDSDRDGL
ECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SNNREDQAPGLLRPDGSAGLAGDGNGDGVKDSLQVAVASTRDLTLVAGSRDGKLIPDSNA
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC
RITELVRSDAPAKLPKGMEMPLGLTSFKVSLAEGRSTESFSLYVDSALGANGYWLKNGAG
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCC
TWVNLASEPYGGKVSSEGGRTRLDFQIQDGGEYDADGQADGSITAPGAVAKMPLSILGQT
CEEEECCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCHHHHCCHHHHCCC
PQVDSHGYWF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA