| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121611151
Identifier: 121611151
GI number: 121611151
Start: 4666040
End: 4666603
Strand: Direct
Name: 121611151
Synonym: Veis_4235
Alternate gene names: NA
Gene position: 4666040-4666603 (Clockwise)
Preceding gene: 121611150
Following gene: 121611152
Centisome position: 83.82
GC content: 54.61
Gene sequence:
>564_bases GTGCTCACACGATATGCGGGCAAACTGCCCGAACGCGATATACGCCGGGTTTATGCGGAAACCGTGGGTAAATTCAACTC CGATGCGATGCTGTATTGCGAAGAAAATTGGCAACCAGCAGATGCGCCGCATACGGTCGATGCCCGTGGCATGTCGGATG GGACCTTGAGATTTTTGGCGATCTTGACTGCGCTTCTTACGCGCCCGGAAAAGAGCTTGTTGATCATCGAAGAAATCGAC AATGGCCTGCATCCTTCACGCGCCAACATGCTCTTGGAGATGCTCCAGACCGTTGGCAAGCAGCGCAGCATCGACGTGCT GGCAACCACGCACAATCCGGCACTGCTCGACGCCATGGGCACCGAGATGATTGCATTCATCACCGTAGCGCATAGAGACA GCAAAACAGGCCACAGCGTCTTGACCTTGCTGGAAGACATGAAACGACTGCCAGCACTATTGGCACAAGGAACGACCGGG CACTTGTCAAGCCGGGGATTGATTGAACGATCGCTGCAGCGATCTCTTGATTTCGAAGGCCTGAGCGAGTTTGGCAATGC CTGA
Upstream 100 bases:
>100_bases CCTGGGGGAAATCAAGTGATTACTGAGCTGCGCATGGAAAACTGGAAAAGCTACGCGCAATCTTCCCTGTATATCGATCC GTTGACCGTGTTGAGAGGCA
Downstream 100 bases:
>100_bases GAAAATCCTGATGGCCCGCACCTGGCCTGCATTGGCTGCCGGTGGCACCAGTATTGGCGATGCAACGATAAAACATGTTG CCGAGTACTACGCCAAGGCT
Product: ATPase-like protein
Products: NA
Alternate protein names: ATPase-Like Protein; SMC Domain-Containing Protein; SMC Protein-Like; ATPase; ATPase-Like
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLTRYAGKLPERDIRRVYAETVGKFNSDAMLYCEENWQPADAPHTVDARGMSDGTLRFLAILTALLTRPEKSLLIIEEID NGLHPSRANMLLEMLQTVGKQRSIDVLATTHNPALLDAMGTEMIAFITVAHRDSKTGHSVLTLLEDMKRLPALLAQGTTG HLSSRGLIERSLQRSLDFEGLSEFGNA
Sequences:
>Translated_187_residues MLTRYAGKLPERDIRRVYAETVGKFNSDAMLYCEENWQPADAPHTVDARGMSDGTLRFLAILTALLTRPEKSLLIIEEID NGLHPSRANMLLEMLQTVGKQRSIDVLATTHNPALLDAMGTEMIAFITVAHRDSKTGHSVLTLLEDMKRLPALLAQGTTG HLSSRGLIERSLQRSLDFEGLSEFGNA >Mature_187_residues MLTRYAGKLPERDIRRVYAETVGKFNSDAMLYCEENWQPADAPHTVDARGMSDGTLRFLAILTALLTRPEKSLLIIEEID NGLHPSRANMLLEMLQTVGKQRSIDVLATTHNPALLDAMGTEMIAFITVAHRDSKTGHSVLTLLEDMKRLPALLAQGTTG HLSSRGLIERSLQRSLDFEGLSEFGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20703; Mature: 20703
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRYAGKLPERDIRRVYAETVGKFNSDAMLYCEENWQPADAPHTVDARGMSDGTLRFLA CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH ILTALLTRPEKSLLIIEEIDNGLHPSRANMLLEMLQTVGKQRSIDVLATTHNPALLDAMG HHHHHHCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH TEMIAFITVAHRDSKTGHSVLTLLEDMKRLPALLAQGTTGHLSSRGLIERSLQRSLDFEG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH LSEFGNA HHHCCCC >Mature Secondary Structure MLTRYAGKLPERDIRRVYAETVGKFNSDAMLYCEENWQPADAPHTVDARGMSDGTLRFLA CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH ILTALLTRPEKSLLIIEEIDNGLHPSRANMLLEMLQTVGKQRSIDVLATTHNPALLDAMG HHHHHHCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH TEMIAFITVAHRDSKTGHSVLTLLEDMKRLPALLAQGTTGHLSSRGLIERSLQRSLDFEG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH LSEFGNA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA