| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611079
Identifier: 121611079
GI number: 121611079
Start: 4579490
End: 4580065
Strand: Direct
Name: 121611079
Synonym: Veis_4163
Alternate gene names: NA
Gene position: 4579490-4580065 (Clockwise)
Preceding gene: 121611078
Following gene: 121611082
Centisome position: 82.27
GC content: 60.94
Gene sequence:
>576_bases ATGAGGCAGTCGCCATTCACGGCCGTCTATGACGCATGCGTGTTGTACCCGGCGCCGTTACGGGACTTTCTCATGTGGCT GGGTCTTTCCGGCCGCTTCCGGGCACGTTGGAGTACGCAGATCCACGAGGAATGGAAACGCAACCTGCTGATCAACCGCC CGGATCTTCGCCCCGATCAGGTTGACCGCACATCGGCATTGATGGACCAGGCCATCCCGGATGGCTTGGTCTCGGATTAC GAAGCGCTCATCGCCGGATTGCGCCTGCCAGACCCGGACGACTGCCATGTCCTGGCTGCGGCCATCCGTTGCGGCGCCAG CGTCATCGTGACCTTCAACGAAAAGGATTTTCCGCAGGCAGCGCTCGCGCCCTTCGGCATCGAGGCGCAGCATCCAGACC TTTTCATCGACAACCTGTTCGACCTGGATGCGGCAGCAGTGGTATCGGCAGCGCAGAAGCAGCGGGCGCAGTTGAAGAGC CCGCCACTGGATGTGGATCGCTACCTCGACGCGTTGTTGCGACAAGGTCTGGTCCAGACCGTCAAGGCACTTTCGACCTA TCGGACCATTCTCTGA
Upstream 100 bases:
>100_bases TTGTCGACCTGATGCAGTTCAAGGCCCGGAGAGACCAAGCCAGCGAAGACGCCATGGCGGCGTTGGCGAAACAGGCTCAG GAACTGGGCATGGGCTACGA
Downstream 100 bases:
>100_bases CGAACCCAACGAGGTTTGCCGACCACATGCCTGCTCATGGCAACCCGCACGAACAATCTGTGCGCGTGATCAAAGCCGCC TGCAGCGGAACTGATGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRQSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSTQIHEEWKRNLLINRPDLRPDQVDRTSALMDQAIPDGLVSDY EALIAGLRLPDPDDCHVLAAAIRCGASVIVTFNEKDFPQAALAPFGIEAQHPDLFIDNLFDLDAAAVVSAAQKQRAQLKS PPLDVDRYLDALLRQGLVQTVKALSTYRTIL
Sequences:
>Translated_191_residues MRQSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSTQIHEEWKRNLLINRPDLRPDQVDRTSALMDQAIPDGLVSDY EALIAGLRLPDPDDCHVLAAAIRCGASVIVTFNEKDFPQAALAPFGIEAQHPDLFIDNLFDLDAAAVVSAAQKQRAQLKS PPLDVDRYLDALLRQGLVQTVKALSTYRTIL >Mature_191_residues MRQSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSTQIHEEWKRNLLINRPDLRPDQVDRTSALMDQAIPDGLVSDY EALIAGLRLPDPDDCHVLAAAIRCGASVIVTFNEKDFPQAALAPFGIEAQHPDLFIDNLFDLDAAAVVSAAQKQRAQLKS PPLDVDRYLDALLRQGLVQTVKALSTYRTIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21376; Mature: 21376
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00334 MYB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSTQIHEEWKRNLLINRPDLRPDQ CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH VDRTSALMDQAIPDGLVSDYEALIAGLRLPDPDDCHVLAAAIRCGASVIVTFNEKDFPQA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHH ALAPFGIEAQHPDLFIDNLFDLDAAAVVSAAQKQRAQLKSPPLDVDRYLDALLRQGLVQT HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VKALSTYRTIL HHHHHHHHHCC >Mature Secondary Structure MRQSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSTQIHEEWKRNLLINRPDLRPDQ CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH VDRTSALMDQAIPDGLVSDYEALIAGLRLPDPDDCHVLAAAIRCGASVIVTFNEKDFPQA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHH ALAPFGIEAQHPDLFIDNLFDLDAAAVVSAAQKQRAQLKSPPLDVDRYLDALLRQGLVQT HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VKALSTYRTIL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA