| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611061
Identifier: 121611061
GI number: 121611061
Start: 4560067
End: 4562337
Strand: Direct
Name: 121611061
Synonym: Veis_4145
Alternate gene names: NA
Gene position: 4560067-4562337 (Clockwise)
Preceding gene: 121611060
Following gene: 121611062
Centisome position: 81.92
GC content: 66.18
Gene sequence:
>2271_bases ATGGCCTCCACCATCACCATCGACAAGACCATCGTCAGAGCCGGCGAGACCGCCTTGGTCACCTTTACTTTCTACAATAA GGAGGACATGCTCGTCGTTCGGGGGCAGATTCATAACGTAACCGTCACCGGCGGCACGATGAACGCCGGTTCCCTCTCAG GGATGAATCGGACTGCAACCACCAGATTCTTCACAGCCCAATTCATACCGACCCCGGGCCTGGAGAAATCCGACGCCAAA ATCCGCTACGACGGCACCGGCGATGTCGCCGATGGAGAGGTCACCTTCGCCGTCGACACCCTGCGGCCCACCGTTGCCAG TGCCTCGATCGCCAAAAGCGACCTGCGCCTCGGGGAAAAAACCACCATCACCATCACCTTCAGCGAACTGGTGACCCGCA GCAGCTTCACCATCGATGACCTGCAGATAGACGCCGGCAAGGGCACTTTGAGCAACCTGCGCGTCGCCCCCACCGACACC ACGGCCACCACCACTGCCGCCACCACCTGGCTGGTCGACCTGGAGGCCCCGACCACCCGGCCCGCGACGGGCCTCGATGG CAACCAGATACGGATCAACCTCGACGGCATCACCGATGTCCCGGGCAACGCAGGCGCGGGCCGGGGGGTGAGCGTCCCGG CCCGCTACAACATCGACGACGGTGTGCCGCCCACGGTCACCATCGCGCCGGCAACCACCATCCTGCGGGCCGGCGAGACG ATGAGCGTCACCTTCACCTTCAGCGAGAAGGTCACCGGCTTTGGTACCGAGGACATCCAGTACGACACCAGCAAAGGCAC GCTGGGCGCTCTGACGGCGGTCGGCACCGACGGCAAGGTCTGGAACGCCACCTACACCCCCCAGCCCGGCACCGAGAGCG CCAACAACACCATCCGCGTGAACCTCAGCGGCGTCCGGGACGCGCAGGACAACGCCGGCGTGGGCACCGGCACCAGCGGC AACTTCGGCATCGACACCGTGCGCCCCACGGTCAACGTGACGATCAGCGACGCCCGCCTGACCGCTGGCGAAAGCGCCAC CATCACCTTCACCTTCAGCGAGCGCGTCACCGGCTTCGCGAAAAATGCCATCGATCTGTCCCAGGCCAACGGCACGCTCG GCGACCTGACGCCGGTCGGCACCGACGGCACAACCTGGACCGCCACCTTCACCCCCACGGCCAGACTGGCGCGCACCACC AACAACCGGCTCACCCTGAACCTGTACAACGTGCGCGATGCCGCAGGCAACGCCCCGGCGGCGAACACCTACGCGTTCAA CCAGTACACCGTAGACACCATGGTCTTTGTGCTCAGCAACGCCACGGTGAATCGCGAGCAGTTGGTGCTGAGCTACAGCG ACGAAACGATGCTCGACGGGAACGCGGACCGTGCCCCGACCAACGAGTCCTTTACCGTGCTGGTCGATGGCACGCGCATC GATGTCAGCCGGGTGACGGTGGATGCAGCGGCCAGGACGGTGACGCTGACCCTGGCCAGCGCCGTGACCACCGGCCAGAC GGTGACCGTCGCCTACCAGGACACCGACACCAGCGATAACAAGGCGGTACAGGAAGCCGGCACCGGCGACGACGCGACCA GTTTTGCGGCCAGGGCGGTGACCAACCTCACCCGGCCCCCGGTCGCACCCGCCACACCGGAGGCGCCGGATGCGCCGGAC TCCGACCGCGACGGCCTGTCCAACAACCGGGAGGACCAGGCCCCCGGCCTGCTGCGCCCCGACGGCTCGGCCGGTATGGC TGGTGATGGCAACGGCGATGGCGTCAAAGACAGCCAGCAGGCCGCCGTCGCTTCGACCCGCGACCAGACCCTGGTGGCCG GCAGCCAGAACGGCAAATTGATCCCCGACAGCAACGCGCGCATCACCGAACTGGTGCGCAGCGATGCCCCGGCCAACCTG CCCAAGGGCATGGAGATGCCGATCGGCCTGACCTCATTCAAGGTATCGCTGGCCGAGGGCCGCAGCACCGAGAGCTTCAG CCTGTACGTAGATCAGGCGCTCGGCGCCAACGGCTACTGGCTCAAGAACGGCGCCGGCACCTGGGTGAACCTGGCCAGCG AACCGTATGGTGGCAAGGTGGCCAGCGAAGGCGGGCGCATGCGGCTGGACTTTCAGATCCAGGACGGCGGCCAGTACGAT GCCGACGGACTGGTCAACGGCAGCATCAGCGCGCCCGGCGCCGTGGCGAAGATGCCGCTGTCCATCGTCGGGCAGTCGGC CCAGGTCGATTCGCATGGCTTTTGGTACTGA
Upstream 100 bases:
>100_bases TCAGCGCATCAGCGCATCAGCGCATCAGCGCATCAGCGCATCAGCGCATCAGCGCATCAGCGCATCAGCGTAATCCTCGC CTCGTCGAAAGGATAGCACC
Downstream 100 bases:
>100_bases CGGGCACTGATTGGCCCTGCGCACATCCGCCACGCGCGCCGTGCGGCTGCGCGTGGCGGCCAGCGATCGCTCTGGCTCGG CGTCGAACGGATGCCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Pyrrolo-Quinoline Quinone; Glycosyl Hydrolase BNR Repeat; Flagellar Hook-Length Control Protein FliK; S-Layer Domain Protein; BNR Repeat-Containing Glycosyl Hydrolase; RTX xin; Outer Membrane Adhesin Like Protein; Fibronectin Type III Domain Protein
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MASTITIDKTIVRAGETALVTFTFYNKEDMLVVRGQIHNVTVTGGTMNAGSLSGMNRTATTRFFTAQFIPTPGLEKSDAK IRYDGTGDVADGEVTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSELVTRSSFTIDDLQIDAGKGTLSNLRVAPTDT TATTTAATTWLVDLEAPTTRPATGLDGNQIRINLDGITDVPGNAGAGRGVSVPARYNIDDGVPPTVTIAPATTILRAGET MSVTFTFSEKVTGFGTEDIQYDTSKGTLGALTAVGTDGKVWNATYTPQPGTESANNTIRVNLSGVRDAQDNAGVGTGTSG NFGIDTVRPTVNVTISDARLTAGESATITFTFSERVTGFAKNAIDLSQANGTLGDLTPVGTDGTTWTATFTPTARLARTT NNRLTLNLYNVRDAAGNAPAANTYAFNQYTVDTMVFVLSNATVNREQLVLSYSDETMLDGNADRAPTNESFTVLVDGTRI DVSRVTVDAAARTVTLTLASAVTTGQTVTVAYQDTDTSDNKAVQEAGTGDDATSFAARAVTNLTRPPVAPATPEAPDAPD SDRDGLSNNREDQAPGLLRPDGSAGMAGDGNGDGVKDSQQAAVASTRDQTLVAGSQNGKLIPDSNARITELVRSDAPANL PKGMEMPIGLTSFKVSLAEGRSTESFSLYVDQALGANGYWLKNGAGTWVNLASEPYGGKVASEGGRMRLDFQIQDGGQYD ADGLVNGSISAPGAVAKMPLSIVGQSAQVDSHGFWY
Sequences:
>Translated_756_residues MASTITIDKTIVRAGETALVTFTFYNKEDMLVVRGQIHNVTVTGGTMNAGSLSGMNRTATTRFFTAQFIPTPGLEKSDAK IRYDGTGDVADGEVTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSELVTRSSFTIDDLQIDAGKGTLSNLRVAPTDT TATTTAATTWLVDLEAPTTRPATGLDGNQIRINLDGITDVPGNAGAGRGVSVPARYNIDDGVPPTVTIAPATTILRAGET MSVTFTFSEKVTGFGTEDIQYDTSKGTLGALTAVGTDGKVWNATYTPQPGTESANNTIRVNLSGVRDAQDNAGVGTGTSG NFGIDTVRPTVNVTISDARLTAGESATITFTFSERVTGFAKNAIDLSQANGTLGDLTPVGTDGTTWTATFTPTARLARTT NNRLTLNLYNVRDAAGNAPAANTYAFNQYTVDTMVFVLSNATVNREQLVLSYSDETMLDGNADRAPTNESFTVLVDGTRI DVSRVTVDAAARTVTLTLASAVTTGQTVTVAYQDTDTSDNKAVQEAGTGDDATSFAARAVTNLTRPPVAPATPEAPDAPD SDRDGLSNNREDQAPGLLRPDGSAGMAGDGNGDGVKDSQQAAVASTRDQTLVAGSQNGKLIPDSNARITELVRSDAPANL PKGMEMPIGLTSFKVSLAEGRSTESFSLYVDQALGANGYWLKNGAGTWVNLASEPYGGKVASEGGRMRLDFQIQDGGQYD ADGLVNGSISAPGAVAKMPLSIVGQSAQVDSHGFWY >Mature_755_residues ASTITIDKTIVRAGETALVTFTFYNKEDMLVVRGQIHNVTVTGGTMNAGSLSGMNRTATTRFFTAQFIPTPGLEKSDAKI RYDGTGDVADGEVTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSELVTRSSFTIDDLQIDAGKGTLSNLRVAPTDTT ATTTAATTWLVDLEAPTTRPATGLDGNQIRINLDGITDVPGNAGAGRGVSVPARYNIDDGVPPTVTIAPATTILRAGETM SVTFTFSEKVTGFGTEDIQYDTSKGTLGALTAVGTDGKVWNATYTPQPGTESANNTIRVNLSGVRDAQDNAGVGTGTSGN FGIDTVRPTVNVTISDARLTAGESATITFTFSERVTGFAKNAIDLSQANGTLGDLTPVGTDGTTWTATFTPTARLARTTN NRLTLNLYNVRDAAGNAPAANTYAFNQYTVDTMVFVLSNATVNREQLVLSYSDETMLDGNADRAPTNESFTVLVDGTRID VSRVTVDAAARTVTLTLASAVTTGQTVTVAYQDTDTSDNKAVQEAGTGDDATSFAARAVTNLTRPPVAPATPEAPDAPDS DRDGLSNNREDQAPGLLRPDGSAGMAGDGNGDGVKDSQQAAVASTRDQTLVAGSQNGKLIPDSNARITELVRSDAPANLP KGMEMPIGLTSFKVSLAEGRSTESFSLYVDQALGANGYWLKNGAGTWVNLASEPYGGKVASEGGRMRLDFQIQDGGQYDA DGLVNGSISAPGAVAKMPLSIVGQSAQVDSHGFWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78943; Mature: 78812
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTITIDKTIVRAGETALVTFTFYNKEDMLVVRGQIHNVTVTGGTMNAGSLSGMNRTAT CCCEEEECHHHEECCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEE TRFFTAQFIPTPGLEKSDAKIRYDGTGDVADGEVTFAVDTLRPTVASASIAKSDLRLGEK EEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE TTITITFSELVTRSSFTIDDLQIDAGKGTLSNLRVAPTDTTATTTAATTWLVDLEAPTTR EEEEEEHHHHHCCCCCEEEEEEEECCCCCHHCCEECCCCCCCCEEEEEEEEEECCCCCCC PATGLDGNQIRINLDGITDVPGNAGAGRGVSVPARYNIDDGVPPTVTIAPATTILRAGET CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCEEEEECCCE MSVTFTFSEKVTGFGTEDIQYDTSKGTLGALTAVGTDGKVWNATYTPQPGTESANNTIRV EEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEE NLSGVRDAQDNAGVGTGTSGNFGIDTVRPTVNVTISDARLTAGESATITFTFSERVTGFA EECCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCEEECCCCEEEEEEEHHHCCCHH KNAIDLSQANGTLGDLTPVGTDGTTWTATFTPTARLARTTNNRLTLNLYNVRDAAGNAPA HCCEEEHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEEEEEEEEEECCCCCCCC ANTYAFNQYTVDTMVFVLSNATVNREQLVLSYSDETMLDGNADRAPTNESFTVLVDGTRI CCEEEECEEEHEEEEEEEECCCCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEEECCEE DVSRVTVDAAARTVTLTLASAVTTGQTVTVAYQDTDTSDNKAVQEAGTGDDATSFAARAV EEEEEEEECCCEEEEEEEEEHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHH TNLTRPPVAPATPEAPDAPDSDRDGLSNNREDQAPGLLRPDGSAGMAGDGNGDGVKDSQQ HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCH AAVASTRDQTLVAGSQNGKLIPDSNARITELVRSDAPANLPKGMEMPIGLTSFKVSLAEG HHHHCCCCCEEEEECCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC RSTESFSLYVDQALGANGYWLKNGAGTWVNLASEPYGGKVASEGGRMRLDFQIQDGGQYD CCCCEEEEEEEHHCCCCCEEEECCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCC ADGLVNGSISAPGAVAKMPLSIVGQSAQVDSHGFWY CCCEEECCCCCCCHHHCCCHHHCCCCCEECCCCCCC >Mature Secondary Structure ASTITIDKTIVRAGETALVTFTFYNKEDMLVVRGQIHNVTVTGGTMNAGSLSGMNRTAT CCEEEECHHHEECCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEE TRFFTAQFIPTPGLEKSDAKIRYDGTGDVADGEVTFAVDTLRPTVASASIAKSDLRLGEK EEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE TTITITFSELVTRSSFTIDDLQIDAGKGTLSNLRVAPTDTTATTTAATTWLVDLEAPTTR EEEEEEHHHHHCCCCCEEEEEEEECCCCCHHCCEECCCCCCCCEEEEEEEEEECCCCCCC PATGLDGNQIRINLDGITDVPGNAGAGRGVSVPARYNIDDGVPPTVTIAPATTILRAGET CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCEEEEECCCE MSVTFTFSEKVTGFGTEDIQYDTSKGTLGALTAVGTDGKVWNATYTPQPGTESANNTIRV EEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEE NLSGVRDAQDNAGVGTGTSGNFGIDTVRPTVNVTISDARLTAGESATITFTFSERVTGFA EECCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCEEECCCCEEEEEEEHHHCCCHH KNAIDLSQANGTLGDLTPVGTDGTTWTATFTPTARLARTTNNRLTLNLYNVRDAAGNAPA HCCEEEHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEEEEEEEEEECCCCCCCC ANTYAFNQYTVDTMVFVLSNATVNREQLVLSYSDETMLDGNADRAPTNESFTVLVDGTRI CCEEEECEEEHEEEEEEEECCCCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEEECCEE DVSRVTVDAAARTVTLTLASAVTTGQTVTVAYQDTDTSDNKAVQEAGTGDDATSFAARAV EEEEEEEECCCEEEEEEEEEHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHH TNLTRPPVAPATPEAPDAPDSDRDGLSNNREDQAPGLLRPDGSAGMAGDGNGDGVKDSQQ HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCH AAVASTRDQTLVAGSQNGKLIPDSNARITELVRSDAPANLPKGMEMPIGLTSFKVSLAEG HHHHCCCCCEEEEECCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC RSTESFSLYVDQALGANGYWLKNGAGTWVNLASEPYGGKVASEGGRMRLDFQIQDGGQYD CCCCEEEEEEEHHCCCCCEEEECCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCC ADGLVNGSISAPGAVAKMPLSIVGQSAQVDSHGFWY CCCEEECCCCCCCHHHCCCHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA