Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611060

Identifier: 121611060

GI number: 121611060

Start: 4556822

End: 4559167

Strand: Direct

Name: 121611060

Synonym: Veis_4144

Alternate gene names: NA

Gene position: 4556822-4559167 (Clockwise)

Preceding gene: 121611059

Following gene: 121611061

Centisome position: 81.86

GC content: 66.92

Gene sequence:

>2346_bases
ATGGCCTCCACCATCAGGATCAACAAGCCCATCGTCAGAGCCGGCGAGACCGCCTGGGTCACCTTTACTTTCATCAATAA
CGAGTACATGCGCATCGATGGGGATCAGATTCGTGACGTGACCGTCACCGGCGGCACGCTGAGTGCCGATTCCCTCGGAG
TGCATACCATCGTTTCAAACAACATATCCTTCAAAGCCAGATTCACACCGACCCCGAACCTGGAGAAATCCGACTGCAAA
ATCCGCTACAACGGCTCCGGCGATATCGCCGATGGAGAGCTCACCTTCGCCGTCGACACCCTGCGGCCCACCGTTGCCAG
TGCCTCGATCGCCAAAAGCGACCTGCGCCTCGGGGAAAAAACCACCATCACCATCACCTTCAGCGAACGGGTGCTGCGCG
ACACCTTCACGCTCGATGACCTGCAGGTGGACGCCGGCAAGGGCACTTTGAGCAACCTGCGCGTCGCCCCCTCCGACACC
ACGGCCACCACCACCGCCGCCACCACCTGGCTGGTCGACCTGGAGGCCCCGGCCACCCGGCCCGCGACGGGCCTCGATGG
CAACCAGATACGGATCAACCTCGACGACATCACCGATGTCCCGGGCAACGCAGGCGCAAGCCGGGGGGTGAGCCTCGCCC
GCTACAACATCGACGCGCCGCCCACGGTCGCCATCACGGGCCAGCCCGCCACCCTCAAGATCGGCGAGTCCTTCACCGTC
ACCTTCACCTTCGACGAGCGCGTCACCGGCTTTGGTGCCGAGGACATCCAGTACGACACCAGCAAAGGCACGCTGGGCGC
TCTGACGGCCGTCGGCACCGACGGCAAGGTCTGGAGCGCCAGCTACACGCCCCGGTCCGGCATCGAGAGCGCCGAAAACA
CCATCCGCGTGAATCTCAGCGGCGTCCGGGACGTGCGGGACAACGCCGGCGTGGGCACCGCCACCAGCGGCAACTTCAGC
ATCGACACCGTGCGCCCCACGGTCAACGTGACGATCAGCGACGAGCGCCTCACCGCTGGCGAAACCGCCACCATCACCAT
CACCTTCAGCGAGCGCGTCACCGGCTTCACGAAAGAGGACATCGGCCTGTCCCGGGCCAACGGCACGCTCGGCGACCTGA
CCCCGGTCGGCACCGACGGCAAAACCTGGACCGCCACCTTCACCCCCACGGCCAACCTGGAGCGCCCCTACCCCTCCACC
AACAGCCAGCTCACCCTGAACCTGGCCAATGTCAGGGATGCCGCAGGCAACACCGTCGCCAACAACACCTACTCGCTCCG
GTACACCGTAGACACCATGGTCTTTGCGCTCAGCAGCGCCACGGTGAACCGCGACCAGTTGGTGCTGGGCTACGGCGCCG
AAACGGATCTCGACGGGAACGCAGACCGCGCCCCGACCAACGAGTCCTTTACCGTGCTGGTCGATGGCACGCGCATCGAC
GTCAGCCGGGTGACGGTGGATGCAGCGGCCCGGACGGTCACGCTGACCCTGGCCCGCGCCGTGGCTGCCGGCCAGCAGGT
GAGCATCGCCTACCAGGACACCGACACCAGCGACGGCAAAGCGCTACAGGAGGTCAACGACGGCGACGACGCGGCCAGCT
TCGCGGCCACGCCGGTGACCAACCTCACCCCGTCCCCGGTCGCACCCGCCACACCGGAGGCGTCTGGGGCGTCTGGGGCG
TCTGGGGCGTCTGGAGGGTCTGGAGGGTCTGGAGGGTCTGGAGGGTCTGGAGGGTCTGGGGCGCTGGACTCCGACTACGA
CAGTGTGCCCAACGCCCAGGAGGACCAGGCCCCCGGCCTGCTGCGCCCCGATGGCTCGGCCGGCCCGGATGGCGACGGCA
ACGGCGACGGTATCCGGGACAGCCAGCAGGTCGCCGTCAGCTCGACCCGCGACCTGACCCTGGTGGCCGGCAGCCAGGAC
GGCAAACTGATCCCCGGCAGCAATGCGCGCATCACCGAACTGGTGCGCAACGAAGCCCCCGCCAGCCTGCCCAAGGGCAT
GGAAATGCCGATCGGCCTGACGCAATTCAGGGTCGGCCTGTCCGAAGGCCGCTACACCGAGAGCTTCAGCCTGTACGTAG
ACCCGGCGCTCGGCGTCAACGGCTACTGGGTCAAGGACAGCGCCGGCACCTGGGTGAACCTGGCCAGCGAACCCTACGGC
GGCAAAATGAGCACCGAAGGCGGGCGCACGCGGCTGGACTTTGAGATTCAGGACGGCGGCCAGTACGACGCCGACGGGCT
GGCCGATGGCCACATCACCGCCCTTGGCGCCGCAGCGAAGATGCCGCTGTCCATCGTCGGGCAGGCGCCGCCCCAGGTCG
AGTCGCAGGGGGGGTATTGGTTCTGA

Upstream 100 bases:

>100_bases
TCCCTTCCGTCCAAAGGAGAGGCACCGTGACCGCCACCCTCCTGCCTACATTCAAGCGCGCATCAGCGTAATCCTCGCCC
CACTGTGAAAGGACAGCACC

Downstream 100 bases:

>100_bases
GTGTCGCGTCACCGGCCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCAGCGCGGCGTTGCATCGCTGGCCAATACGCTC
GGTATTTGTATTGATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cadherin Domain-Containing Protein; Pyrrolo-Quinoline Quinone; Glycosyl Hydrolase BNR Repeat; Flagellar Hook-Length Control Protein FliK; S-Layer Domain Protein; BNR Repeat-Containing Glycosyl Hydrolase; RTX xin; Outer Membrane Adhesin Like Proteiin; Outer Membrane Adhesin Like Protein; Fibronectin Type III Domain Protein

Number of amino acids: Translated: 781; Mature: 780

Protein sequence:

>781_residues
MASTIRINKPIVRAGETAWVTFTFINNEYMRIDGDQIRDVTVTGGTLSADSLGVHTIVSNNISFKARFTPTPNLEKSDCK
IRYNGSGDIADGELTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSERVLRDTFTLDDLQVDAGKGTLSNLRVAPSDT
TATTTAATTWLVDLEAPATRPATGLDGNQIRINLDDITDVPGNAGASRGVSLARYNIDAPPTVAITGQPATLKIGESFTV
TFTFDERVTGFGAEDIQYDTSKGTLGALTAVGTDGKVWSASYTPRSGIESAENTIRVNLSGVRDVRDNAGVGTATSGNFS
IDTVRPTVNVTISDERLTAGETATITITFSERVTGFTKEDIGLSRANGTLGDLTPVGTDGKTWTATFTPTANLERPYPST
NSQLTLNLANVRDAAGNTVANNTYSLRYTVDTMVFALSSATVNRDQLVLGYGAETDLDGNADRAPTNESFTVLVDGTRID
VSRVTVDAAARTVTLTLARAVAAGQQVSIAYQDTDTSDGKALQEVNDGDDAASFAATPVTNLTPSPVAPATPEASGASGA
SGASGGSGGSGGSGGSGGSGALDSDYDSVPNAQEDQAPGLLRPDGSAGPDGDGNGDGIRDSQQVAVSSTRDLTLVAGSQD
GKLIPGSNARITELVRNEAPASLPKGMEMPIGLTQFRVGLSEGRYTESFSLYVDPALGVNGYWVKDSAGTWVNLASEPYG
GKMSTEGGRTRLDFEIQDGGQYDADGLADGHITALGAAAKMPLSIVGQAPPQVESQGGYWF

Sequences:

>Translated_781_residues
MASTIRINKPIVRAGETAWVTFTFINNEYMRIDGDQIRDVTVTGGTLSADSLGVHTIVSNNISFKARFTPTPNLEKSDCK
IRYNGSGDIADGELTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSERVLRDTFTLDDLQVDAGKGTLSNLRVAPSDT
TATTTAATTWLVDLEAPATRPATGLDGNQIRINLDDITDVPGNAGASRGVSLARYNIDAPPTVAITGQPATLKIGESFTV
TFTFDERVTGFGAEDIQYDTSKGTLGALTAVGTDGKVWSASYTPRSGIESAENTIRVNLSGVRDVRDNAGVGTATSGNFS
IDTVRPTVNVTISDERLTAGETATITITFSERVTGFTKEDIGLSRANGTLGDLTPVGTDGKTWTATFTPTANLERPYPST
NSQLTLNLANVRDAAGNTVANNTYSLRYTVDTMVFALSSATVNRDQLVLGYGAETDLDGNADRAPTNESFTVLVDGTRID
VSRVTVDAAARTVTLTLARAVAAGQQVSIAYQDTDTSDGKALQEVNDGDDAASFAATPVTNLTPSPVAPATPEASGASGA
SGASGGSGGSGGSGGSGGSGALDSDYDSVPNAQEDQAPGLLRPDGSAGPDGDGNGDGIRDSQQVAVSSTRDLTLVAGSQD
GKLIPGSNARITELVRNEAPASLPKGMEMPIGLTQFRVGLSEGRYTESFSLYVDPALGVNGYWVKDSAGTWVNLASEPYG
GKMSTEGGRTRLDFEIQDGGQYDADGLADGHITALGAAAKMPLSIVGQAPPQVESQGGYWF
>Mature_780_residues
ASTIRINKPIVRAGETAWVTFTFINNEYMRIDGDQIRDVTVTGGTLSADSLGVHTIVSNNISFKARFTPTPNLEKSDCKI
RYNGSGDIADGELTFAVDTLRPTVASASIAKSDLRLGEKTTITITFSERVLRDTFTLDDLQVDAGKGTLSNLRVAPSDTT
ATTTAATTWLVDLEAPATRPATGLDGNQIRINLDDITDVPGNAGASRGVSLARYNIDAPPTVAITGQPATLKIGESFTVT
FTFDERVTGFGAEDIQYDTSKGTLGALTAVGTDGKVWSASYTPRSGIESAENTIRVNLSGVRDVRDNAGVGTATSGNFSI
DTVRPTVNVTISDERLTAGETATITITFSERVTGFTKEDIGLSRANGTLGDLTPVGTDGKTWTATFTPTANLERPYPSTN
SQLTLNLANVRDAAGNTVANNTYSLRYTVDTMVFALSSATVNRDQLVLGYGAETDLDGNADRAPTNESFTVLVDGTRIDV
SRVTVDAAARTVTLTLARAVAAGQQVSIAYQDTDTSDGKALQEVNDGDDAASFAATPVTNLTPSPVAPATPEASGASGAS
GASGGSGGSGGSGGSGGSGALDSDYDSVPNAQEDQAPGLLRPDGSAGPDGDGNGDGIRDSQQVAVSSTRDLTLVAGSQDG
KLIPGSNARITELVRNEAPASLPKGMEMPIGLTQFRVGLSEGRYTESFSLYVDPALGVNGYWVKDSAGTWVNLASEPYGG
KMSTEGGRTRLDFEIQDGGQYDADGLADGHITALGAAAKMPLSIVGQAPPQVESQGGYWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81188; Mature: 81057

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTIRINKPIVRAGETAWVTFTFINNEYMRIDGDQIRDVTVTGGTLSADSLGVHTIVSN
CCCEEEECCCEEECCCEEEEEEEEECCEEEEECCCCEEEEEEECCEECCCCCCEEEEEEC
NISFKARFTPTPNLEKSDCKIRYNGSGDIADGELTFAVDTLRPTVASASIAKSDLRLGEK
CEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE
TTITITFSERVLRDTFTLDDLQVDAGKGTLSNLRVAPSDTTATTTAATTWLVDLEAPATR
EEEEEEECCHHHHHHCCCCCEEEECCCCCHHCCEECCCCCCCEEEEEEEEEEEECCCCCC
PATGLDGNQIRINLDDITDVPGNAGASRGVSLARYNIDAPPTVAITGQPATLKIGESFTV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEECCEEEE
TFTFDERVTGFGAEDIQYDTSKGTLGALTAVGTDGKVWSASYTPRSGIESAENTIRVNLS
EEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEC
GVRDVRDNAGVGTATSGNFSIDTVRPTVNVTISDERLTAGETATITITFSERVTGFTKED
CCEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCEEECCCEEEEEEEEHHCCCCCCHHH
IGLSRANGTLGDLTPVGTDGKTWTATFTPTANLERPYPSTNSQLTLNLANVRDAAGNTVA
CCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEC
NNTYSLRYTVDTMVFALSSATVNRDQLVLGYGAETDLDGNADRAPTNESFTVLVDGTRID
CCEEEEEEEHHEEEEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEE
VSRVTVDAAARTVTLTLARAVAAGQQVSIAYQDTDTSDGKALQEVNDGDDAASFAATPVT
EEEEEEEHHHEEEEEEEHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCHHEECCCCC
NLTPSPVAPATPEASGASGASGASGGSGGSGGSGGSGGSGALDSDYDSVPNAQEDQAPGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LRPDGSAGPDGDGNGDGIRDSQQVAVSSTRDLTLVAGSQDGKLIPGSNARITELVRNEAP
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCCHHHHHHHCCCC
ASLPKGMEMPIGLTQFRVGLSEGRYTESFSLYVDPALGVNGYWVKDSAGTWVNLASEPYG
CCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCC
GKMSTEGGRTRLDFEIQDGGQYDADGLADGHITALGAAAKMPLSIVGQAPPQVESQGGYW
CEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECHHHCCCEEEECCCCCCCCCCCCCC
F
C
>Mature Secondary Structure 
ASTIRINKPIVRAGETAWVTFTFINNEYMRIDGDQIRDVTVTGGTLSADSLGVHTIVSN
CCEEEECCCEEECCCEEEEEEEEECCEEEEECCCCEEEEEEECCEECCCCCCEEEEEEC
NISFKARFTPTPNLEKSDCKIRYNGSGDIADGELTFAVDTLRPTVASASIAKSDLRLGEK
CEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE
TTITITFSERVLRDTFTLDDLQVDAGKGTLSNLRVAPSDTTATTTAATTWLVDLEAPATR
EEEEEEECCHHHHHHCCCCCEEEECCCCCHHCCEECCCCCCCEEEEEEEEEEEECCCCCC
PATGLDGNQIRINLDDITDVPGNAGASRGVSLARYNIDAPPTVAITGQPATLKIGESFTV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEECCEEEE
TFTFDERVTGFGAEDIQYDTSKGTLGALTAVGTDGKVWSASYTPRSGIESAENTIRVNLS
EEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEC
GVRDVRDNAGVGTATSGNFSIDTVRPTVNVTISDERLTAGETATITITFSERVTGFTKED
CCEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCEEECCCEEEEEEEEHHCCCCCCHHH
IGLSRANGTLGDLTPVGTDGKTWTATFTPTANLERPYPSTNSQLTLNLANVRDAAGNTVA
CCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEC
NNTYSLRYTVDTMVFALSSATVNRDQLVLGYGAETDLDGNADRAPTNESFTVLVDGTRID
CCEEEEEEEHHEEEEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEE
VSRVTVDAAARTVTLTLARAVAAGQQVSIAYQDTDTSDGKALQEVNDGDDAASFAATPVT
EEEEEEEHHHEEEEEEEHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCHHEECCCCC
NLTPSPVAPATPEASGASGASGASGGSGGSGGSGGSGGSGALDSDYDSVPNAQEDQAPGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LRPDGSAGPDGDGNGDGIRDSQQVAVSSTRDLTLVAGSQDGKLIPGSNARITELVRNEAP
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCCHHHHHHHCCCC
ASLPKGMEMPIGLTQFRVGLSEGRYTESFSLYVDPALGVNGYWVKDSAGTWVNLASEPYG
CCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCC
GKMSTEGGRTRLDFEIQDGGQYDADGLADGHITALGAAAKMPLSIVGQAPPQVESQGGYW
CEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECHHHCCCEEEECCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA