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The map label for this gene is glxA [H]

Identifier: 121610977

GI number: 121610977

Start: 4454478

End: 4455683

Strand: Direct

Name: glxA [H]

Synonym: Veis_4061

Alternate gene names: 121610977

Gene position: 4454478-4455683 (Clockwise)

Preceding gene: 121610976

Following gene: 121610981

Centisome position: 80.02

GC content: 67.33

Gene sequence:

>1206_bases
ATGCCCGCACGCATGCCCGTCAAGCCCGGCGACAGCCCGGATGCCCGCGCCAAGGCCGGCAGCACCCATATCGGCTTCAT
CCTGCTGCAGGACTACTCGATGATCGCCTTTGCCAATGCCGTGGAAACCTTGCGCATGGCCAACTACCTGAGCCGGCGCC
CGCTGTACCGCTGGAGCGTGGTCAGCCCCGATCAGACAGTGGCGCTGGCGAGCAACGGCCTGGCCGTCGCCGCCATCGGT
GACCTGGGCAGTCTGTCCGAATGCCAGCAACTGTTCGTCTGCGGCGGCGTCGACATCCGCCACAACACCAGTGACACCGT
GCGCCGGCTGCTGCGCCAATGCGCCAGCTACGGCGTGCCGATGGGCGGGCTGTGCACCGGCGCCTACGCACTGGCCAGCG
CCGGCCTGCTCGACGGCTACCGCTGCGCCATCCATTGGGAAAACCTGGCCGCGATCCGCGAGGAATTCCCGAAAGTGCGG
TTTTCTTCCGAAGTCTTCGTCATCGACCGCGACCGCATCACCTGCTCCGGCGGCACGGCGCCGCTGCACCTGATGCTGCA
CCTGGTGCGCGCGCAGCATGGCGCCCGGCTGATGATGGACATCTCGGAACAATTTCTGGTCGAGCGCCTGCGCTCCAGCG
ACGACCGCCAGCGCATCCCCCAACCCGCGTGCATAGGGCCAGGCTACCAGCACCTGACCGAGGCCGCCGCGCTGATGGCC
GCGCGCATCGAAGAGCCGCTGCCACTGGCCGAACTGGCCCGCGCCGTCGCGCTATCGCTGCGCCAGCTCGAACGCCTGTT
CCACCGCTACTTCAGCATGAACCCGGCGCAGTACTACATGAACCTGCGCTTGCACCGCGCCCAGGAACTGCTCACGCACA
GCAGCCTGCGCATCATGCAGATCACGGTGGCCTGCGGCTTTCAGTCCTCGTCGCATTTTTGCAAAGCCTACCGCAGCCTG
TTCGGTCATTCGCCCAGCGAAGAAAGGCGGCGCCACATCGGCGGCGCGAAGCCACATGCCGCCACATGGCGCGCCAGCCC
GTCCGCCGCACGCCGCGTCCGGCTGGCGCCGGCGAGCCTGCCCGACTTCGGACCCCTGACCCGTGCCGCCGCCTGTGATT
CCATTTCTACATCGTTCGTGAACGCGAAGGCGGAGCGCAGGCAGTACCAATGCACGGCAAGCGACGCCGACGAAGTGCAC
GGGTGA

Upstream 100 bases:

>100_bases
GCTGCTGGCCATCATCCTGGACCGGCTCACCGAAAGCTTCGGCGTGGCCCGCCGGGGCCGCGACAACTGAGCCGGCGCCA
ACGACCAGGACGCGCGCCCC

Downstream 100 bases:

>100_bases
TTCAGCAATGGAATGAGCCACCGGCAAGCCATCTGCGCCACCTGCACCACCTGCGCGCAGCATCAGGCCCGCCGACATGG
CCCGCACCCGGAGAAACGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPARMPVKPGDSPDARAKAGSTHIGFILLQDYSMIAFANAVETLRMANYLSRRPLYRWSVVSPDQTVALASNGLAVAAIG
DLGSLSECQQLFVCGGVDIRHNTSDTVRRLLRQCASYGVPMGGLCTGAYALASAGLLDGYRCAIHWENLAAIREEFPKVR
FSSEVFVIDRDRITCSGGTAPLHLMLHLVRAQHGARLMMDISEQFLVERLRSSDDRQRIPQPACIGPGYQHLTEAAALMA
ARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHRAQELLTHSSLRIMQITVACGFQSSSHFCKAYRSL
FGHSPSEERRRHIGGAKPHAATWRASPSAARRVRLAPASLPDFGPLTRAAACDSISTSFVNAKAERRQYQCTASDADEVH
G

Sequences:

>Translated_401_residues
MPARMPVKPGDSPDARAKAGSTHIGFILLQDYSMIAFANAVETLRMANYLSRRPLYRWSVVSPDQTVALASNGLAVAAIG
DLGSLSECQQLFVCGGVDIRHNTSDTVRRLLRQCASYGVPMGGLCTGAYALASAGLLDGYRCAIHWENLAAIREEFPKVR
FSSEVFVIDRDRITCSGGTAPLHLMLHLVRAQHGARLMMDISEQFLVERLRSSDDRQRIPQPACIGPGYQHLTEAAALMA
ARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHRAQELLTHSSLRIMQITVACGFQSSSHFCKAYRSL
FGHSPSEERRRHIGGAKPHAATWRASPSAARRVRLAPASLPDFGPLTRAAACDSISTSFVNAKAERRQYQCTASDADEVH
G
>Mature_400_residues
PARMPVKPGDSPDARAKAGSTHIGFILLQDYSMIAFANAVETLRMANYLSRRPLYRWSVVSPDQTVALASNGLAVAAIGD
LGSLSECQQLFVCGGVDIRHNTSDTVRRLLRQCASYGVPMGGLCTGAYALASAGLLDGYRCAIHWENLAAIREEFPKVRF
SSEVFVIDRDRITCSGGTAPLHLMLHLVRAQHGARLMMDISEQFLVERLRSSDDRQRIPQPACIGPGYQHLTEAAALMAA
RIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHRAQELLTHSSLRIMQITVACGFQSSSHFCKAYRSLF
GHSPSEERRRHIGGAKPHAATWRASPSAARRVRLAPASLPDFGPLTRAAACDSISTSFVNAKAERRQYQCTASDADEVHG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 44206; Mature: 44075

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARMPVKPGDSPDARAKAGSTHIGFILLQDYSMIAFANAVETLRMANYLSRRPLYRWSV
CCCCCCCCCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VSPDQTVALASNGLAVAAIGDLGSLSECQQLFVCGGVDIRHNTSDTVRRLLRQCASYGVP
CCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCC
MGGLCTGAYALASAGLLDGYRCAIHWENLAAIREEFPKVRFSSEVFVIDRDRITCSGGTA
CCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCEECCEEEEEECCEEEECCCCH
PLHLMLHLVRAQHGARLMMDISEQFLVERLRSSDDRQRIPQPACIGPGYQHLTEAAALMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
ARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHRAQELLTHSSLRIMQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ITVACGFQSSSHFCKAYRSLFGHSPSEERRRHIGGAKPHAATWRASPSAARRVRLAPASL
EEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCC
PDFGPLTRAAACDSISTSFVNAKAERRQYQCTASDADEVHG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCC
>Mature Secondary Structure 
PARMPVKPGDSPDARAKAGSTHIGFILLQDYSMIAFANAVETLRMANYLSRRPLYRWSV
CCCCCCCCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VSPDQTVALASNGLAVAAIGDLGSLSECQQLFVCGGVDIRHNTSDTVRRLLRQCASYGVP
CCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCC
MGGLCTGAYALASAGLLDGYRCAIHWENLAAIREEFPKVRFSSEVFVIDRDRITCSGGTA
CCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCEECCEEEEEECCEEEECCCCH
PLHLMLHLVRAQHGARLMMDISEQFLVERLRSSDDRQRIPQPACIGPGYQHLTEAAALMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
ARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHRAQELLTHSSLRIMQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ITVACGFQSSSHFCKAYRSLFGHSPSEERRRHIGGAKPHAATWRASPSAARRVRLAPASL
EEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCC
PDFGPLTRAAACDSISTSFVNAKAERRQYQCTASDADEVHG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]