| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610905
Identifier: 121610905
GI number: 121610905
Start: 4375524
End: 4376528
Strand: Direct
Name: 121610905
Synonym: Veis_3987
Alternate gene names: NA
Gene position: 4375524-4376528 (Clockwise)
Preceding gene: 121610904
Following gene: 121610906
Centisome position: 78.6
GC content: 69.45
Gene sequence:
>1005_bases ATGCTGCCTTCCCTGCTTTTGCCGCTTTCGCGCCCGCTGCGCCTGTGCGCCGCCGCCTGGCTCGGGCTGGCGCTGGCGGC CCTGCCCGCCGGCAGCCCGCTGGCGCAACAGGGCTATCCGGGCAAGCCGATCCGGCTGGTGGTGCCGTTTCTGGCCGGCG GCGGGCCTGACATGACGGCGCGCACCGTGGCGCAAAAAATGGCCGAGCACAACGGCTGGAGCGTGCTGGTGGACAACCGC CCCGGTGCCAGCGGCAACCTGGGCGTGGACAGCGTCGCCAAGTCGGCGCCCGATGGCCATACGCTGGTGCTGGGGCAGAC CAGCAACCTGGCCATCAATCCCGCGCTCTACCCCGAACTGCCCTATGACCCGCTCAAGGACCTGGTGCCGGTGGCGCTGG TGTCATCCTCGCCGATGGTGCTGGTCACGCACCCGAAGTCGGCCTTCAAGACCTACGCCGACGTGGTCGCGGCAGCCAGG ATGCAGCCCGACACGATCACACTGGGGTTTTCCGGCAGCACCGCGCATCTGGCGGGCAATCTGGCCGAGAACGCTGCCGG CATCCAACTGCGCCACATCCCCTACAAAGGCGCAGCCCAGGGCATGACGGACCTGGTGGGTGGGCAGATCGATCTGTACC TGTCATCCGTGACCACGCTGCTGGGCCAGGTGCGCAACGGCAAGCTGCGCGCCATCGTGCTCACCTCGGCCCGGCGCTCG GGCCAGTTGCCGGACACACCCACGCTGGCCGAGTCCGGCTACCCGGGCTTCGATGCCGTGACCTGGTACGGCATCCTCGC GCCGGCCGGCACGCCCGCCGCCATCGTGCAGCAGTTGAACCGGGCCATCAACCAGGCGCTGGCGCAGCCCGATGTGGCCG AGAAACTGCGCTCCGAAGGCGGCGAGGTGCTCGGCGGCAGCGCCGAGCGCTTTGCCGAACTGCTGCGCACCGAGGTCACG CGCTGGGGCAAGATCGTCAAGGACTCGGGGGCCAGCATGAACTGA
Upstream 100 bases:
>100_bases GCGCCTGCGGCACTGCGTGATGTGCGATGCCTTCGGCGCACCGCGTGTCATGCGGCACCGAAGGCGCACAGTGTGCTGTT CGCCACGGAGACCCACGACC
Downstream 100 bases:
>100_bases CTCCTCGTTTCCCGTTCCTGCGCAGCGGCCGACCACTTCACCCTTTCGTACCCTCTGCCCTTTCTTTTCACCGGAGATGC AACGCCATGGACCAACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLPSLLLPLSRPLRLCAAAWLGLALAALPAGSPLAQQGYPGKPIRLVVPFLAGGGPDMTARTVAQKMAEHNGWSVLVDNR PGASGNLGVDSVAKSAPDGHTLVLGQTSNLAINPALYPELPYDPLKDLVPVALVSSSPMVLVTHPKSAFKTYADVVAAAR MQPDTITLGFSGSTAHLAGNLAENAAGIQLRHIPYKGAAQGMTDLVGGQIDLYLSSVTTLLGQVRNGKLRAIVLTSARRS GQLPDTPTLAESGYPGFDAVTWYGILAPAGTPAAIVQQLNRAINQALAQPDVAEKLRSEGGEVLGGSAERFAELLRTEVT RWGKIVKDSGASMN
Sequences:
>Translated_334_residues MLPSLLLPLSRPLRLCAAAWLGLALAALPAGSPLAQQGYPGKPIRLVVPFLAGGGPDMTARTVAQKMAEHNGWSVLVDNR PGASGNLGVDSVAKSAPDGHTLVLGQTSNLAINPALYPELPYDPLKDLVPVALVSSSPMVLVTHPKSAFKTYADVVAAAR MQPDTITLGFSGSTAHLAGNLAENAAGIQLRHIPYKGAAQGMTDLVGGQIDLYLSSVTTLLGQVRNGKLRAIVLTSARRS GQLPDTPTLAESGYPGFDAVTWYGILAPAGTPAAIVQQLNRAINQALAQPDVAEKLRSEGGEVLGGSAERFAELLRTEVT RWGKIVKDSGASMN >Mature_334_residues MLPSLLLPLSRPLRLCAAAWLGLALAALPAGSPLAQQGYPGKPIRLVVPFLAGGGPDMTARTVAQKMAEHNGWSVLVDNR PGASGNLGVDSVAKSAPDGHTLVLGQTSNLAINPALYPELPYDPLKDLVPVALVSSSPMVLVTHPKSAFKTYADVVAAAR MQPDTITLGFSGSTAHLAGNLAENAAGIQLRHIPYKGAAQGMTDLVGGQIDLYLSSVTTLLGQVRNGKLRAIVLTSARRS GQLPDTPTLAESGYPGFDAVTWYGILAPAGTPAAIVQQLNRAINQALAQPDVAEKLRSEGGEVLGGSAERFAELLRTEVT RWGKIVKDSGASMN
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34774; Mature: 34774
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSLLLPLSRPLRLCAAAWLGLALAALPAGSPLAQQGYPGKPIRLVVPFLAGGGPDMTA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHH RTVAQKMAEHNGWSVLVDNRPGASGNLGVDSVAKSAPDGHTLVLGQTSNLAINPALYPEL HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC PYDPLKDLVPVALVSSSPMVLVTHPKSAFKTYADVVAAARMQPDTITLGFSGSTAHLAGN CCCHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCC LAENAAGIQLRHIPYKGAAQGMTDLVGGQIDLYLSSVTTLLGQVRNGKLRAIVLTSARRS HHCCCCCEEEEECCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHC GQLPDTPTLAESGYPGFDAVTWYGILAPAGTPAAIVQQLNRAINQALAQPDVAEKLRSEG CCCCCCCCHHCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC GEVLGGSAERFAELLRTEVTRWGKIVKDSGASMN CCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLPSLLLPLSRPLRLCAAAWLGLALAALPAGSPLAQQGYPGKPIRLVVPFLAGGGPDMTA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHH RTVAQKMAEHNGWSVLVDNRPGASGNLGVDSVAKSAPDGHTLVLGQTSNLAINPALYPEL HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC PYDPLKDLVPVALVSSSPMVLVTHPKSAFKTYADVVAAARMQPDTITLGFSGSTAHLAGN CCCHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCC LAENAAGIQLRHIPYKGAAQGMTDLVGGQIDLYLSSVTTLLGQVRNGKLRAIVLTSARRS HHCCCCCEEEEECCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHC GQLPDTPTLAESGYPGFDAVTWYGILAPAGTPAAIVQQLNRAINQALAQPDVAEKLRSEG CCCCCCCCHHCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC GEVLGGSAERFAELLRTEVTRWGKIVKDSGASMN CCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]