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The map label for this gene is yiaN [C]

Identifier: 121610874

GI number: 121610874

Start: 4341493

End: 4342770

Strand: Direct

Name: yiaN [C]

Synonym: Veis_3956

Alternate gene names: 121610874

Gene position: 4341493-4342770 (Clockwise)

Preceding gene: 121610873

Following gene: 121610875

Centisome position: 77.99

GC content: 62.99

Gene sequence:

>1278_bases
ATGAGCCTGGCGATGATTGCCACCATGGTGCTGTGCTTTGCGCTCACCATCTCGGTGGCCGTGTCCATCGGCCTGGCCTC
GATCCTCGGCATTCAGTTGTCGAACGTGAACATGCTGATCGCCACCAAGGAGATGTTCAGCGCGATCAACAAGTTTCCGC
TGGCCGCCATCCCCTTCTTCATCCTGGCCGGCAACCTGATGGAAACCGGCGGCATCTCGCGCCGGCTGGTGGAGTTTGCC
AAGAGCATCGTCGGCGGCGTGCAAGGCGGCCTGCCGATGACCTGCGTGCTCACCTGCATGATCTTTGCTGCGGTCTCGGG
CTCGTCGGTGGCCACCACCTTTGCCATTGGCGCGATCCTGATTCCGGCGCTCATCCGGCATGGCTATCCCGGCAGCTACG
CAGCGGCGCTGCAGGCCACCAGCGCCGAACTGGGCGTGATCATTCCGCCGTCGATTCCGATGATCCTGTACGGCGTCAGC
GCCGAGGTCTCGATCGGCGAACTGTTCAGCGCCGGTTTTGGTCCCGGCCTGTTGATCAGCGCTGCGCTGATGCTGTTCGT
CTGGGCCTACTGCAAATACAAGGGCTGGGGCAAGAACGACGGCGACGGCCGCATGCCCGTGGGCCGGGCCACGCTGCAAG
CCGGCTGGGCGCTGCTGATGCCGGTGATCATCCTGGGCGGCATCTACGGCGGCGTCTTCACCCCCACCGAGGCTTCGGCC
GTGGCCGTGTTCTATGCGCTGATGGTGGGCGTGGTGATCTACCGCGAGATCCAAGTCGCGGACCTGTTTGCCATCCTGCG
CAAATCCGCGCTGTCGGCGGCGGTGATCATGTTCATCATCGCCAATGCCGGCTTGTTTGCCTTTCTGATCACGCGCGCCG
GCGTGCCCGATGCGATCGGGCACTGGCTGCAGGCCGTGCTGCAATCGCCGGCGCTGTTCCTGCTGGGCGTGAATGCAGCG
CTGTTCGTGATCGGCATGTTCATCGAGACCAGCGCCGCCATCATCGTGCTGGCGCCGATCCTGGCGCCGGTGGCAATGCA
CTTTGGCATCGATCCGGTGCATTTCGGCCTGGTCATGGTGGTCAATCTGGCGCTGGGCATGATCACACCGCCGTTTGGCG
TCAACCTGTTTGCTGCCTGCACGGTGGCAAGACTGCCGCTCGAGCACATCGTCCGGCATCTGCTGCCCTTCGTCGGCGTG
ATTTTGCTGTGCCTGATGCTCATCACCTATGTGCCATCGATCTCGCTGTCAGTGCGTGATCTGGTCTATGCAAAGTAG

Upstream 100 bases:

>100_bases
TCTGGGCCTATCTGGCGCTGCCGGTGGGCGGCCTGTTTGCCGTCGTCGGCATCATCGGCCACTTCATCGACCCCCGGCGC
ATGGAACTGGAGAGCGCCAC

Downstream 100 bases:

>100_bases
CTACAATCCCCGGGTCAGGAGAGAGTGCCAGGCCCCCGGGGCCAGCGCACCGCCGAAGGCGCAGGCAGCGGCCGAACGCT
CAGGCAAAAGGACTGGCAGG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSLAMIATMVLCFALTISVAVSIGLASILGIQLSNVNMLIATKEMFSAINKFPLAAIPFFILAGNLMETGGISRRLVEFA
KSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIRHGYPGSYAAALQATSAELGVIIPPSIPMILYGVS
AEVSIGELFSAGFGPGLLISAALMLFVWAYCKYKGWGKNDGDGRMPVGRATLQAGWALLMPVIILGGIYGGVFTPTEASA
VAVFYALMVGVVIYREIQVADLFAILRKSALSAAVIMFIIANAGLFAFLITRAGVPDAIGHWLQAVLQSPALFLLGVNAA
LFVIGMFIETSAAIIVLAPILAPVAMHFGIDPVHFGLVMVVNLALGMITPPFGVNLFAACTVARLPLEHIVRHLLPFVGV
ILLCLMLITYVPSISLSVRDLVYAK

Sequences:

>Translated_425_residues
MSLAMIATMVLCFALTISVAVSIGLASILGIQLSNVNMLIATKEMFSAINKFPLAAIPFFILAGNLMETGGISRRLVEFA
KSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIRHGYPGSYAAALQATSAELGVIIPPSIPMILYGVS
AEVSIGELFSAGFGPGLLISAALMLFVWAYCKYKGWGKNDGDGRMPVGRATLQAGWALLMPVIILGGIYGGVFTPTEASA
VAVFYALMVGVVIYREIQVADLFAILRKSALSAAVIMFIIANAGLFAFLITRAGVPDAIGHWLQAVLQSPALFLLGVNAA
LFVIGMFIETSAAIIVLAPILAPVAMHFGIDPVHFGLVMVVNLALGMITPPFGVNLFAACTVARLPLEHIVRHLLPFVGV
ILLCLMLITYVPSISLSVRDLVYAK
>Mature_424_residues
SLAMIATMVLCFALTISVAVSIGLASILGIQLSNVNMLIATKEMFSAINKFPLAAIPFFILAGNLMETGGISRRLVEFAK
SIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIRHGYPGSYAAALQATSAELGVIIPPSIPMILYGVSA
EVSIGELFSAGFGPGLLISAALMLFVWAYCKYKGWGKNDGDGRMPVGRATLQAGWALLMPVIILGGIYGGVFTPTEASAV
AVFYALMVGVVIYREIQVADLFAILRKSALSAAVIMFIIANAGLFAFLITRAGVPDAIGHWLQAVLQSPALFLLGVNAAL
FVIGMFIETSAAIIVLAPILAPVAMHFGIDPVHFGLVMVVNLALGMITPPFGVNLFAACTVARLPLEHIVRHLLPFVGVI
LLCLMLITYVPSISLSVRDLVYAK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=382, Percent_Identity=38.7434554973822, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44548; Mature: 44417

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAMIATMVLCFALTISVAVSIGLASILGIQLSNVNMLIATKEMFSAINKFPLAAIPFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCHHHHHHH
ILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAIL
HHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IPALIRHGYPGSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFSAGFGPGLLIS
HHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHH
AALMLFVWAYCKYKGWGKNDGDGRMPVGRATLQAGWALLMPVIILGGIYGGVFTPTEASA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VAVFYALMVGVVIYREIQVADLFAILRKSALSAAVIMFIIANAGLFAFLITRAGVPDAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HWLQAVLQSPALFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAMHFGIDPVHFGLVMV
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VNLALGMITPPFGVNLFAACTVARLPLEHIVRHLLPFVGVILLCLMLITYVPSISLSVRD
HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LVYAK
HHHCC
>Mature Secondary Structure 
SLAMIATMVLCFALTISVAVSIGLASILGIQLSNVNMLIATKEMFSAINKFPLAAIPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCHHHHHHH
ILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAIL
HHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IPALIRHGYPGSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFSAGFGPGLLIS
HHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHH
AALMLFVWAYCKYKGWGKNDGDGRMPVGRATLQAGWALLMPVIILGGIYGGVFTPTEASA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VAVFYALMVGVVIYREIQVADLFAILRKSALSAAVIMFIIANAGLFAFLITRAGVPDAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HWLQAVLQSPALFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAMHFGIDPVHFGLVMV
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VNLALGMITPPFGVNLFAACTVARLPLEHIVRHLLPFVGVILLCLMLITYVPSISLSVRD
HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LVYAK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]