Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610869

Identifier: 121610869

GI number: 121610869

Start: 4335375

End: 4336532

Strand: Direct

Name: 121610869

Synonym: Veis_3951

Alternate gene names: NA

Gene position: 4335375-4336532 (Clockwise)

Preceding gene: 121610868

Following gene: 121610870

Centisome position: 77.88

GC content: 66.75

Gene sequence:

>1158_bases
ATGAAACCACAGCGCTTTTTCCCCTGCATTGCCTTGGCCCTGGCGGCCGCCCTGGGCTGCGGCCAGACCCTGGCCGACAT
CCATGTCGGCGTCACGCTGTCGGCCACCGGCCCTGCGGCCTCGCTGGGCATTCCCGAGAAAAACACGGTGGCGCTGATGC
CGCGCAGCATCGCCGGCGAGAAGGTTCACTACATCGTGCTCGACGATGCGTCGGACACCACGACCGCCGTGAACAATACC
CGCAAGCTGATCAGCGAGAGCAAGGTGGACATCATCCTGGGGTCGAGCATCACGCCGAACTCGCTGGCCATGATCGACGT
GGTGGCCGAGGCGCGCACGCCGATGATCTCGATGGCCGCGTCGGCGCGCATCGTCGAGCCCATGGACCCGAAACGCAAAT
GGGTCTTCAAGACACCGCAAAACGACATCATGATGTCGCTGGCCATCGCCGAGCACATGGCCGACGCGGGCATCAAGACG
GTGGCCTTCATCGGCTTTGCCGACGCCTATGGCGAAGGCTGGTACCAGGAGTTCGGCAAGGTCGCCGCGATCAAAAATCT
GCACATCGTGGCCAACGAGCGCTATGTGCGCACCGACACCTCGGTCACGGGCCAGACCCTGAAGATCATCCTGGCCAAGC
CGGATGCGGTGCTGATCGCCGGCTCGGGCACGCCGGCGGCGCTGCCCCAGAAGGCCCTGCGCGAGCGCGGCTACACCGGC
CGGATCTACCAGACCCACGGCGTGGCCAATGCCGACTTCCTGCGCGTCGGCGGCAAGGACGTGGAAGGCAGCTTTCTGCC
CGCCGGCCCGGTGCTGGTGGCCGCGCAGTTGCCGGCCTCGCACCCGGTAAAGAAGTCTGCCTCGGCTTACGTGGCCGCCT
ATGAGGCCGTCCATGGCGCGGGCAGCGTCTCCACCTTCGGCGCGCACAGTTGGGATGCCGGCGTGCTGCTGGCTGCCGCC
GTGCCGGCCGCGCTCGGCAAGGCCCGGCCCGGCAGCGTGGAATTTCGCATGGCCCTGCGCGATGCGCTGGAGCAACTGCG
CGAAGTGCCCGGCGCGCATGGCATCTTCAGCATGTCCGAGACCGACCACCTGGGCCTGGACCAGCGTGCCCGGGTGATGG
TCAAGATCGAAAACGGCGCCTGGAAATACCAGCCCTGA

Upstream 100 bases:

>100_bases
AAACCATGGCCCCGATCGTGGCCGATCTGTTTTTCGGCGGCGTAGTGGCCGTGCAACTGCCGCCTTCATCCGCAGCCATT
TCATCCAAGGAGACAAACCC

Downstream 100 bases:

>100_bases
GCCATCCGGCCATGGATTTGCAGATTGCCCTGCTGTTGGTGCAAGACGGCCTGGTCAATGGCGCCATCTACGGACTGATG
GCGCTGGCCCTGGTGCTGGT

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKPQRFFPCIALALAAALGCGQTLADIHVGVTLSATGPAASLGIPEKNTVALMPRSIAGEKVHYIVLDDASDTTTAVNNT
RKLISESKVDIILGSSITPNSLAMIDVVAEARTPMISMAASARIVEPMDPKRKWVFKTPQNDIMMSLAIAEHMADAGIKT
VAFIGFADAYGEGWYQEFGKVAAIKNLHIVANERYVRTDTSVTGQTLKIILAKPDAVLIAGSGTPAALPQKALRERGYTG
RIYQTHGVANADFLRVGGKDVEGSFLPAGPVLVAAQLPASHPVKKSASAYVAAYEAVHGAGSVSTFGAHSWDAGVLLAAA
VPAALGKARPGSVEFRMALRDALEQLREVPGAHGIFSMSETDHLGLDQRARVMVKIENGAWKYQP

Sequences:

>Translated_385_residues
MKPQRFFPCIALALAAALGCGQTLADIHVGVTLSATGPAASLGIPEKNTVALMPRSIAGEKVHYIVLDDASDTTTAVNNT
RKLISESKVDIILGSSITPNSLAMIDVVAEARTPMISMAASARIVEPMDPKRKWVFKTPQNDIMMSLAIAEHMADAGIKT
VAFIGFADAYGEGWYQEFGKVAAIKNLHIVANERYVRTDTSVTGQTLKIILAKPDAVLIAGSGTPAALPQKALRERGYTG
RIYQTHGVANADFLRVGGKDVEGSFLPAGPVLVAAQLPASHPVKKSASAYVAAYEAVHGAGSVSTFGAHSWDAGVLLAAA
VPAALGKARPGSVEFRMALRDALEQLREVPGAHGIFSMSETDHLGLDQRARVMVKIENGAWKYQP
>Mature_385_residues
MKPQRFFPCIALALAAALGCGQTLADIHVGVTLSATGPAASLGIPEKNTVALMPRSIAGEKVHYIVLDDASDTTTAVNNT
RKLISESKVDIILGSSITPNSLAMIDVVAEARTPMISMAASARIVEPMDPKRKWVFKTPQNDIMMSLAIAEHMADAGIKT
VAFIGFADAYGEGWYQEFGKVAAIKNLHIVANERYVRTDTSVTGQTLKIILAKPDAVLIAGSGTPAALPQKALRERGYTG
RIYQTHGVANADFLRVGGKDVEGSFLPAGPVLVAAQLPASHPVKKSASAYVAAYEAVHGAGSVSTFGAHSWDAGVLLAAA
VPAALGKARPGSVEFRMALRDALEQLREVPGAHGIFSMSETDHLGLDQRARVMVKIENGAWKYQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40706; Mature: 40706

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQRFFPCIALALAAALGCGQTLADIHVGVTLSATGPAASLGIPEKNTVALMPRSIAGE
CCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
KVHYIVLDDASDTTTAVNNTRKLISESKVDIILGSSITPNSLAMIDVVAEARTPMISMAA
EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHCCCEEEHHC
SARIVEPMDPKRKWVFKTPQNDIMMSLAIAEHMADAGIKTVAFIGFADAYGEGWYQEFGK
CCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHCC
VAAIKNLHIVANERYVRTDTSVTGQTLKIILAKPDAVLIAGSGTPAALPQKALRERGYTG
EEEEEEEEEEECCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCC
RIYQTHGVANADFLRVGGKDVEGSFLPAGPVLVAAQLPASHPVKKSASAYVAAYEAVHGA
EEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
GSVSTFGAHSWDAGVLLAAAVPAALGKARPGSVEFRMALRDALEQLREVPGAHGIFSMSE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
TDHLGLDQRARVMVKIENGAWKYQP
CCCCCCCCCCEEEEEEECCEEECCC
>Mature Secondary Structure
MKPQRFFPCIALALAAALGCGQTLADIHVGVTLSATGPAASLGIPEKNTVALMPRSIAGE
CCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
KVHYIVLDDASDTTTAVNNTRKLISESKVDIILGSSITPNSLAMIDVVAEARTPMISMAA
EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHCCCEEEHHC
SARIVEPMDPKRKWVFKTPQNDIMMSLAIAEHMADAGIKTVAFIGFADAYGEGWYQEFGK
CCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHCC
VAAIKNLHIVANERYVRTDTSVTGQTLKIILAKPDAVLIAGSGTPAALPQKALRERGYTG
EEEEEEEEEEECCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCC
RIYQTHGVANADFLRVGGKDVEGSFLPAGPVLVAAQLPASHPVKKSASAYVAAYEAVHGA
EEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
GSVSTFGAHSWDAGVLLAAAVPAALGKARPGSVEFRMALRDALEQLREVPGAHGIFSMSE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
TDHLGLDQRARVMVKIENGAWKYQP
CCCCCCCCCCEEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA