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The map label for this gene is ycfQ [C]

Identifier: 121610868

GI number: 121610868

Start: 4334740

End: 4335378

Strand: Direct

Name: ycfQ [C]

Synonym: Veis_3950

Alternate gene names: 121610868

Gene position: 4334740-4335378 (Clockwise)

Preceding gene: 121610867

Following gene: 121610869

Centisome position: 77.87

GC content: 64.95

Gene sequence:

>639_bases
GTGGCCCGAGGGCGATCTCCCGGATACGACGAGCAGCGCGACATGATCGCGCGCCATGCGGCCGCGCTGTTTGCGCAGCG
CGGCTACCCTGCGACCTCGATGAATGAGGTGGCCCAGGCCTGCGGCCTGTCCAAACCCACGCTGTACCACTACTTCAGGG
ACAAGTACCACCTGCTGCTGCATATCGCCGACGACCATGTGTCGCGCCTGCAGGCGCTGGTCGACGACATCGGGCAGCGC
CAGTTGCCGCCCGAGCCACGGCTGCGCGCGTTGATCGAGCGCTTCGTGCAGGAATACGCGCAGGCCCGCGATGCCCACCG
CGTGCTGACCGAGGACGTGAAGTTTCTCCAGCCCGAAGACAGCGCGCTGGTGCTGAACAAGGAGCGCGCCGTGGTGGCGG
CCTTTGCCAATGCGCTGGCGCAGATGCGCCCCGAGACCGAGGCTGCGGGCCTGACCAAGGCGCTGACGATGCTGCTGTTC
GGGATGATCAACTGGATGTTCACCTGGCTCAGGCCCGATGGTGAACTCAAGCACGAAACCATGGCCCCGATCGTGGCCGA
TCTGTTTTTCGGCGGCGTAGTGGCCGTGCAACTGCCGCCTTCATCCGCAGCCATTTCATCCAAGGAGACAAACCCATGA

Upstream 100 bases:

>100_bases
CCGTTTCTCCGCACCAAGGCGCGCTGCCTGCATGCCGGCCGCGCCCCGCGATGAGGCAAGATGGCGCCCCCGATACTTGG
AATGCAAAGGAAAACTGCCT

Downstream 100 bases:

>100_bases
AACCACAGCGCTTTTTCCCCTGCATTGCCTTGGCCCTGGCGGCCGCCCTGGGCTGCGGCCAGACCCTGGCCGACATCCAT
GTCGGCGTCACGCTGTCGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator Of Paa Operon; Paa Operon Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MARGRSPGYDEQRDMIARHAAALFAQRGYPATSMNEVAQACGLSKPTLYHYFRDKYHLLLHIADDHVSRLQALVDDIGQR
QLPPEPRLRALIERFVQEYAQARDAHRVLTEDVKFLQPEDSALVLNKERAVVAAFANALAQMRPETEAAGLTKALTMLLF
GMINWMFTWLRPDGELKHETMAPIVADLFFGGVVAVQLPPSSAAISSKETNP

Sequences:

>Translated_212_residues
MARGRSPGYDEQRDMIARHAAALFAQRGYPATSMNEVAQACGLSKPTLYHYFRDKYHLLLHIADDHVSRLQALVDDIGQR
QLPPEPRLRALIERFVQEYAQARDAHRVLTEDVKFLQPEDSALVLNKERAVVAAFANALAQMRPETEAAGLTKALTMLLF
GMINWMFTWLRPDGELKHETMAPIVADLFFGGVVAVQLPPSSAAISSKETNP
>Mature_211_residues
ARGRSPGYDEQRDMIARHAAALFAQRGYPATSMNEVAQACGLSKPTLYHYFRDKYHLLLHIADDHVSRLQALVDDIGQRQ
LPPEPRLRALIERFVQEYAQARDAHRVLTEDVKFLQPEDSALVLNKERAVVAAFANALAQMRPETEAAGLTKALTMLLFG
MINWMFTWLRPDGELKHETMAPIVADLFFGGVVAVQLPPSSAAISSKETNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23698; Mature: 23567

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGRSPGYDEQRDMIARHAAALFAQRGYPATSMNEVAQACGLSKPTLYHYFRDKYHLLL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHEEE
HIADDHVSRLQALVDDIGQRQLPPEPRLRALIERFVQEYAQARDAHRVLTEDVKFLQPED
EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SALVLNKERAVVAAFANALAQMRPETEAAGLTKALTMLLFGMINWMFTWLRPDGELKHET
CEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
MAPIVADLFFGGVVAVQLPPSSAAISSKETNP
HHHHHHHHHHCCEEEEEECCCCHHCCCCCCCC
>Mature Secondary Structure 
ARGRSPGYDEQRDMIARHAAALFAQRGYPATSMNEVAQACGLSKPTLYHYFRDKYHLLL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHEEE
HIADDHVSRLQALVDDIGQRQLPPEPRLRALIERFVQEYAQARDAHRVLTEDVKFLQPED
EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SALVLNKERAVVAAFANALAQMRPETEAAGLTKALTMLLFGMINWMFTWLRPDGELKHET
CEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
MAPIVADLFFGGVVAVQLPPSSAAISSKETNP
HHHHHHHHHHCCEEEEEECCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA