| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is paaG [H]
Identifier: 121610860
GI number: 121610860
Start: 4328079
End: 4328912
Strand: Direct
Name: paaG [H]
Synonym: Veis_3942
Alternate gene names: 121610860
Gene position: 4328079-4328912 (Clockwise)
Preceding gene: 121610859
Following gene: 121610861
Centisome position: 77.75
GC content: 71.46
Gene sequence:
>834_bases ATGTCTGAACCCCTTGTCTTGGTGACGCAATCGGGTGCCGTGCAAACGCTGGCGCTGAACCGGCCGGCCGCGCTGAACAG CTTGACCGCCGCGTTGCACGCGCAGTTGCTGGCCGCGCTGGAGGCCACCGCTGCCGCGTGCGACGTGCGCTGCGTGGTCA TCACGGGCATGGGGCGGGCGTTTTGCGCCGGCCAGGACCTGAATGACATCGCCGCCGCGCCTGCGTCCGGTTCGGGCGAT CCGGCGCCCGCGCCCGGTTCGGCGGGCGCTCAGGCCCAGGACTTGGGCCGCGTGATCGAGACCCTGTACCGGCCGCTGTG TCTGCGCATCCGCAGCATGCCCGTTCCGGTGCTGGCAGCGGTCAACGGTGTGGCCGCCGGTGCCGGTGCCTGCCTGGCTC TGGGCTGCGATCTGGTGCTGGCGGCGCGTTCGGCCAGTTTCATCATGGCTTTCAGCAAAATCGGGCTGCTGCCCGATACC GGCGGAACCTGGCTGCTGCCGCGCCTGGTGGGGCGCGCGCAGGCTCTGGGGCTGGCCTTGCTGGGCGACAAACTGCCTGC GCCCGAGGCCGAGCGTCGCGGCCTGATCTGGCGCTGCGTGGACGACGCCAGTTTGCCGGACGAGGCGCTGGCCCTGGCGC AGCGCCTGGCCGCCATGCCCGTCAAGGCGCTGGTGGCCACGCGCCAGGCCATGGATGCTGCGGCGCAACTGGACTACGGC CAGGCGCTGGCGCAGGAAGCGGCCATGCAGCAAACGCTGGGCGCCGGTGCCGATTACCGCGAAGGCGTCGCGGCCTTCGC CGGCAAGCGCGCCCCTCGTTTCACCGAGCGTTGA
Upstream 100 bases:
>100_bases CTACCGCACGGTCGGTCAATGATGTTCGTGATCGATCGATGCAGGACTTCCCCTTCCTGATGGTGATTGATGGTGATGGG CAGCAGCAGCAGGAGCATTC
Downstream 100 bases:
>100_bases GCAGACCATGCCTTGCTCCACCGACAGACCCAACCCCCAGGCCGTGGCCGACCATGTGCGCAGCGGCATGCTGGCCAAGG ACCGCGCCACCCGGGGCCTG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSEPLVLVTQSGAVQTLALNRPAALNSLTAALHAQLLAALEATAAACDVRCVVITGMGRAFCAGQDLNDIAAAPASGSGD PAPAPGSAGAQAQDLGRVIETLYRPLCLRIRSMPVPVLAAVNGVAAGAGACLALGCDLVLAARSASFIMAFSKIGLLPDT GGTWLLPRLVGRAQALGLALLGDKLPAPEAERRGLIWRCVDDASLPDEALALAQRLAAMPVKALVATRQAMDAAAQLDYG QALAQEAAMQQTLGAGADYREGVAAFAGKRAPRFTER
Sequences:
>Translated_277_residues MSEPLVLVTQSGAVQTLALNRPAALNSLTAALHAQLLAALEATAAACDVRCVVITGMGRAFCAGQDLNDIAAAPASGSGD PAPAPGSAGAQAQDLGRVIETLYRPLCLRIRSMPVPVLAAVNGVAAGAGACLALGCDLVLAARSASFIMAFSKIGLLPDT GGTWLLPRLVGRAQALGLALLGDKLPAPEAERRGLIWRCVDDASLPDEALALAQRLAAMPVKALVATRQAMDAAAQLDYG QALAQEAAMQQTLGAGADYREGVAAFAGKRAPRFTER >Mature_276_residues SEPLVLVTQSGAVQTLALNRPAALNSLTAALHAQLLAALEATAAACDVRCVVITGMGRAFCAGQDLNDIAAAPASGSGDP APAPGSAGAQAQDLGRVIETLYRPLCLRIRSMPVPVLAAVNGVAAGAGACLALGCDLVLAARSASFIMAFSKIGLLPDTG GTWLLPRLVGRAQALGLALLGDKLPAPEAERRGLIWRCVDDASLPDEALALAQRLAAMPVKALVATRQAMDAAAQLDYGQ ALAQEAAMQQTLGAGADYREGVAAFAGKRAPRFTER
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=268, Percent_Identity=27.9850746268657, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI31542718, Length=268, Percent_Identity=27.2388059701493, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI45643119, Length=229, Percent_Identity=26.6375545851528, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI260275230, Length=229, Percent_Identity=26.6375545851528, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI260274832, Length=269, Percent_Identity=24.5353159851301, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI70995211, Length=211, Percent_Identity=30.3317535545024, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4502327, Length=275, Percent_Identity=30.1818181818182, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI37594469, Length=251, Percent_Identity=27.4900398406374, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI37594471, Length=251, Percent_Identity=27.4900398406374, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI68989263, Length=218, Percent_Identity=27.9816513761468, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI20127408, Length=195, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI157694516, Length=261, Percent_Identity=21.8390804597701, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI213417737, Length=261, Percent_Identity=21.8390804597701, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787660, Length=271, Percent_Identity=49.8154981549816, Blast_Score=221, Evalue=3e-59, Organism=Escherichia coli, GI1787659, Length=277, Percent_Identity=35.7400722021661, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI221142681, Length=282, Percent_Identity=30.8510638297872, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788597, Length=277, Percent_Identity=26.3537906137184, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082183, Length=280, Percent_Identity=22.5, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788682, Length=219, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25145438, Length=274, Percent_Identity=32.8467153284672, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17554946, Length=280, Percent_Identity=30, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17540306, Length=271, Percent_Identity=30.6273062730627, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560910, Length=272, Percent_Identity=26.1029411764706, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17549921, Length=239, Percent_Identity=28.0334728033473, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17535521, Length=222, Percent_Identity=26.5765765765766, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17536985, Length=232, Percent_Identity=28.0172413793103, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI25144157, Length=203, Percent_Identity=29.5566502463054, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25144160, Length=203, Percent_Identity=29.5566502463054, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17540714, Length=258, Percent_Identity=25.968992248062, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17534483, Length=236, Percent_Identity=25.4237288135593, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI20129971, Length=264, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24653477, Length=264, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI19922422, Length=281, Percent_Identity=27.0462633451957, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24653139, Length=267, Percent_Identity=29.5880149812734, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24654903, Length=220, Percent_Identity=26.8181818181818, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI19920382, Length=255, Percent_Identity=26.2745098039216, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28571730, Length=209, Percent_Identity=28.2296650717703, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571729, Length=209, Percent_Identity=28.2296650717703, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=267, Percent_Identity=28.0898876404494, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21357171, Length=277, Percent_Identity=26.7148014440433, Blast_Score=74, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 28245; Mature: 28114
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLVLVTQSGAVQTLALNRPAALNSLTAALHAQLLAALEATAAACDVRCVVITGMGRA CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCH FCAGQDLNDIAAAPASGSGDPAPAPGSAGAQAQDLGRVIETLYRPLCLRIRSMPVPVLAA HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VNGVAAGAGACLALGCDLVLAARSASFIMAFSKIGLLPDTGGTWLLPRLVGRAQALGLAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LGDKLPAPEAERRGLIWRCVDDASLPDEALALAQRLAAMPVKALVATRQAMDAAAQLDYG HCCCCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAQEAAMQQTLGAGADYREGVAAFAGKRAPRFTER HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEPLVLVTQSGAVQTLALNRPAALNSLTAALHAQLLAALEATAAACDVRCVVITGMGRA CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCH FCAGQDLNDIAAAPASGSGDPAPAPGSAGAQAQDLGRVIETLYRPLCLRIRSMPVPVLAA HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VNGVAAGAGACLALGCDLVLAARSASFIMAFSKIGLLPDTGGTWLLPRLVGRAQALGLAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LGDKLPAPEAERRGLIWRCVDDASLPDEALALAQRLAAMPVKALVATRQAMDAAAQLDYG HCCCCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAQEAAMQQTLGAGADYREGVAAFAGKRAPRFTER HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]