| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610787
Identifier: 121610787
GI number: 121610787
Start: 4264158
End: 4265132
Strand: Direct
Name: 121610787
Synonym: Veis_3868
Alternate gene names: NA
Gene position: 4264158-4265132 (Clockwise)
Preceding gene: 121610786
Following gene: 121610788
Centisome position: 76.6
GC content: 63.38
Gene sequence:
>975_bases ATGAAAACGCGGCATATCCGGATCGTGCTCAGTTGCGCATTGCTGAGCCTGACCACAACCCTCACACAGGCTGCGGAGTT TCCCAGCATGCCCGTACGGATCGTGGTGGGCTACGCCACCGGCGGCGCCTCGGACATCGTCGCCCGGCTGCTGCAGCCCG AACTGCAGCAGCGCCTGGGCCAACCCGTCATCATCGATAACCGACCTGGCGCCAACGGCAACATTGCCAATGAAGTGGTC GCTCGCGCCGAAACCGATGGTCATACGCTGCTGCTCGGCAACCCTGGCCCATTGGTCATGAACAGCTTCCTCTACAAGCA ACAGCTGATCGACCCGGCTAAAGCCTTCGTCCCAGTGACGCAGCTCACCGAAAGCCCAATGGTCGTCGTCGTGCCTGCCG CATCGCCGGCCCGGTCGCTGCAGGAACTACTTGATCTGGCTAAACAAAAGTCTGGGGGCCTGTCTTACGGGTCCGCCGGC AATGGCAGTTCGATGCATCTGGCCGGAGCAACACTGCAGATGCGCTCCGGAGCACCTCTCGTGCACGTGCCCTACAAAGG TACCGGTCCAGCCATGACAGACCTGCTGGCAGGCACGCTGGATTTCATGCCCGACAGCCGCTCCACCACCATGCCCTTCA TCCGCGACGGGCGCCTGCGTCCACTGGCCGTCACCGGTGCGCAACGCGTCGCAGACCTGCCGGACGTCCCCACCGTCGCT GAAGCCGGCGTGCCAGGCTTCAAGGTCACCACCTGGCTGGGCATCGTCGCCCCTGCTGGCACACCGTCCGAGCGCGTGCA GCGCCTCTATGAGGCGTTCAGGGCGGCCTTGCAAGCCCCCGCAGTCAAGGCACGGCTCGAGGAACTGGGGACCTATCCCG TCGGCAGTACGCCCAAGGCTTTCGCCCAAGCCCTGGATAGCGAGCGTCAGGAAGCCCGTCAACTCGTACAAAAGACAGGA ATGAAGATCGAATGA
Upstream 100 bases:
>100_bases GAACGCTAGCCCGCCCCCGCCGGACCTGTCCGCGCGACTAAACGACGACGGCCAAGCCCTACCCACACCACCTGAACATC ATTTCGCAAGGAGACAAACC
Downstream 100 bases:
>100_bases CTATCTCGACACGCACATCACCAACTCCGGAAGCGCCGCAGCTGCAGCTTGCACTCTGTGCGCGCTGCTCGGGCCTGAGC TTCCCGCCACAGGTTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKTRHIRIVLSCALLSLTTTLTQAAEFPSMPVRIVVGYATGGASDIVARLLQPELQQRLGQPVIIDNRPGANGNIANEVV ARAETDGHTLLLGNPGPLVMNSFLYKQQLIDPAKAFVPVTQLTESPMVVVVPAASPARSLQELLDLAKQKSGGLSYGSAG NGSSMHLAGATLQMRSGAPLVHVPYKGTGPAMTDLLAGTLDFMPDSRSTTMPFIRDGRLRPLAVTGAQRVADLPDVPTVA EAGVPGFKVTTWLGIVAPAGTPSERVQRLYEAFRAALQAPAVKARLEELGTYPVGSTPKAFAQALDSERQEARQLVQKTG MKIE
Sequences:
>Translated_324_residues MKTRHIRIVLSCALLSLTTTLTQAAEFPSMPVRIVVGYATGGASDIVARLLQPELQQRLGQPVIIDNRPGANGNIANEVV ARAETDGHTLLLGNPGPLVMNSFLYKQQLIDPAKAFVPVTQLTESPMVVVVPAASPARSLQELLDLAKQKSGGLSYGSAG NGSSMHLAGATLQMRSGAPLVHVPYKGTGPAMTDLLAGTLDFMPDSRSTTMPFIRDGRLRPLAVTGAQRVADLPDVPTVA EAGVPGFKVTTWLGIVAPAGTPSERVQRLYEAFRAALQAPAVKARLEELGTYPVGSTPKAFAQALDSERQEARQLVQKTG MKIE >Mature_324_residues MKTRHIRIVLSCALLSLTTTLTQAAEFPSMPVRIVVGYATGGASDIVARLLQPELQQRLGQPVIIDNRPGANGNIANEVV ARAETDGHTLLLGNPGPLVMNSFLYKQQLIDPAKAFVPVTQLTESPMVVVVPAASPARSLQELLDLAKQKSGGLSYGSAG NGSSMHLAGATLQMRSGAPLVHVPYKGTGPAMTDLLAGTLDFMPDSRSTTMPFIRDGRLRPLAVTGAQRVADLPDVPTVA EAGVPGFKVTTWLGIVAPAGTPSERVQRLYEAFRAALQAPAVKARLEELGTYPVGSTPKAFAQALDSERQEARQLVQKTG MKIE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34335; Mature: 34335
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRHIRIVLSCALLSLTTTLTQAAEFPSMPVRIVVGYATGGASDIVARLLQPELQQRLG CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC QPVIIDNRPGANGNIANEVVARAETDGHTLLLGNPGPLVMNSFLYKQQLIDPAKAFVPVT CCEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH QLTESPMVVVVPAASPARSLQELLDLAKQKSGGLSYGSAGNGSSMHLAGATLQMRSGAPL HHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEECCCCCE VHVPYKGTGPAMTDLLAGTLDFMPDSRSTTMPFIRDGRLRPLAVTGAQRVADLPDVPTVA EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHH EAGVPGFKVTTWLGIVAPAGTPSERVQRLYEAFRAALQAPAVKARLEELGTYPVGSTPKA HCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHH FAQALDSERQEARQLVQKTGMKIE HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTRHIRIVLSCALLSLTTTLTQAAEFPSMPVRIVVGYATGGASDIVARLLQPELQQRLG CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC QPVIIDNRPGANGNIANEVVARAETDGHTLLLGNPGPLVMNSFLYKQQLIDPAKAFVPVT CCEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH QLTESPMVVVVPAASPARSLQELLDLAKQKSGGLSYGSAGNGSSMHLAGATLQMRSGAPL HHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEECCCCCE VHVPYKGTGPAMTDLLAGTLDFMPDSRSTTMPFIRDGRLRPLAVTGAQRVADLPDVPTVA EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHH EAGVPGFKVTTWLGIVAPAGTPSERVQRLYEAFRAALQAPAVKARLEELGTYPVGSTPKA HCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHH FAQALDSERQEARQLVQKTGMKIE HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]