| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610788
Identifier: 121610788
GI number: 121610788
Start: 4265129
End: 4265527
Strand: Direct
Name: 121610788
Synonym: Veis_3869
Alternate gene names: NA
Gene position: 4265129-4265527 (Clockwise)
Preceding gene: 121610787
Following gene: 121610789
Centisome position: 76.62
GC content: 65.16
Gene sequence:
>399_bases ATGACTATCTCGACACGCACATCACCAACTCCGGAAGCGCCGCAGCTGCAGCTTGCACTCTGTGCGCGCTGCTCGGGCCT GAGCTTCCCGCCACAGGTTCCGGGTTGCCACCATTGCGGTGCACCCGCCAGCGAGCTGCACATGCAGGACTACGAAGGGC CGCTGCGCCTGCTGAACTTCGTCACCGTCCACGCGACCTTGACGCCCGGCCTTCCGGTACCAGCCGTCATCGGCGAGGTG GCCCTGGCACCGGATCTGGTCGAGGAAGTGCTCATCGACGTCGGCAGCGAAGACGAACTGCGTCTGGGCATGGCCCTGGA GCCAGTCTGGCAGCCCGGGAAGGCTCAAAGTGACGGCACTTGGGTGTTCCGTGCACCTGCAGCGGAGGTGGCATCTTGA
Upstream 100 bases:
>100_bases CCTATCCCGTCGGCAGTACGCCCAAGGCTTTCGCCCAAGCCCTGGATAGCGAGCGTCAGGAAGCCCGTCAACTCGTACAA AAGACAGGAATGAAGATCGA
Downstream 100 bases:
>100_bases ACCGGCTGCTGCGTGAACGCACCGTCTACGTCGTGGGCATCGGCATGCACGCCTATGGCTTCCCATCGGAAACACCTTAT GTGCAACTGGGCCTGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTISTRTSPTPEAPQLQLALCARCSGLSFPPQVPGCHHCGAPASELHMQDYEGPLRLLNFVTVHATLTPGLPVPAVIGEV ALAPDLVEEVLIDVGSEDELRLGMALEPVWQPGKAQSDGTWVFRAPAAEVAS
Sequences:
>Translated_132_residues MTISTRTSPTPEAPQLQLALCARCSGLSFPPQVPGCHHCGAPASELHMQDYEGPLRLLNFVTVHATLTPGLPVPAVIGEV ALAPDLVEEVLIDVGSEDELRLGMALEPVWQPGKAQSDGTWVFRAPAAEVAS >Mature_131_residues TISTRTSPTPEAPQLQLALCARCSGLSFPPQVPGCHHCGAPASELHMQDYEGPLRLLNFVTVHATLTPGLPVPAVIGEVA LAPDLVEEVLIDVGSEDELRLGMALEPVWQPGKAQSDGTWVFRAPAAEVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13947; Mature: 13816
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISTRTSPTPEAPQLQLALCARCSGLSFPPQVPGCHHCGAPASELHMQDYEGPLRLLNF CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH VTVHATLTPGLPVPAVIGEVALAPDLVEEVLIDVGSEDELRLGMALEPVWQPGKAQSDGT HHEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECEEECCCCCCCCCCCCCC WVFRAPAAEVAS EEEECCCHHHCC >Mature Secondary Structure TISTRTSPTPEAPQLQLALCARCSGLSFPPQVPGCHHCGAPASELHMQDYEGPLRLLNF CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH VTVHATLTPGLPVPAVIGEVALAPDLVEEVLIDVGSEDELRLGMALEPVWQPGKAQSDGT HHEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECEEECCCCCCCCCCCCCC WVFRAPAAEVAS EEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA