| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610743
Identifier: 121610743
GI number: 121610743
Start: 4220616
End: 4221212
Strand: Direct
Name: 121610743
Synonym: Veis_3823
Alternate gene names: NA
Gene position: 4220616-4221212 (Clockwise)
Preceding gene: 121610742
Following gene: 121610751
Centisome position: 75.82
GC content: 65.66
Gene sequence:
>597_bases ATGTTTTGCAGGTACCACCCACCCACTCGACTCCCCCAGCCCGGCATGACCTACCGCAGCCCGATCCAACACTGCCGCGC CTGTGGCGCCGCCGTGGTCTACCGCCGGCCCGACGACGGCGACACCAAGCAGCGAGCGGTATGCCCGGCATGCCACACCG TGCACTACGAAAACCCGCTCAACGTCGTGGGCACGGTGCCGGCACTGCCCGACGGGCGCGTCCTGCTGTGCCAGCGCAAC ATCGAACCGCGCCGGGGCCGGTGGACGCTACCGGCGGGCTTCATGGAGCTCGATGAAACCACGTCCGAAGGCGCCGCGCG CGAGACCGACGAAGAAGCCGGCGCGCAGATCGAAATGGGCCCACTGTTTTGCCTGCTCAATGTGCGCCGCGTCGGCCAAG TGCACCTGTTTTACCGCGCCACGCTGCTGAGCGAGCGCCTGAACCCGGGCCTCGAAACCATGCAGGCGCGCCTGTTCACC GAAGACGAAGTGCCCTGGGACGAACTCGCATTCCGCACGGTCAAGGAAACACTGACCTGCTACTTTGCCGATCGCAAAAC CGGCGCCATGGGCATGCACTTCATCGACATCGAATAG
Upstream 100 bases:
>100_bases ACCCCGCTGCGCCTGCGCGTGGTGTGAGCGGTCGCCAACGCACCCACAGCCGCTATTTCGCTATTCTTTCTTTCGCTATT CTTTCAATAGCTGCAAACGC
Downstream 100 bases:
>100_bases GCCCGGATCCGCTGGCGCCCAGGCATGGGGCGCAGATGATGCAGGCCGCTGGCGCAAAAGACGACCAGAAGCCGTGCTGC ATCAATTATTGCCAGCAAAC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; Related Nudix Hydrolase; Mutator MutT Protein; MutT/NUDIX Family Protein; Nudix Hydrolase MutT Family; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFCRYHPPTRLPQPGMTYRSPIQHCRACGAAVVYRRPDDGDTKQRAVCPACHTVHYENPLNVVGTVPALPDGRVLLCQRN IEPRRGRWTLPAGFMELDETTSEGAARETDEEAGAQIEMGPLFCLLNVRRVGQVHLFYRATLLSERLNPGLETMQARLFT EDEVPWDELAFRTVKETLTCYFADRKTGAMGMHFIDIE
Sequences:
>Translated_198_residues MFCRYHPPTRLPQPGMTYRSPIQHCRACGAAVVYRRPDDGDTKQRAVCPACHTVHYENPLNVVGTVPALPDGRVLLCQRN IEPRRGRWTLPAGFMELDETTSEGAARETDEEAGAQIEMGPLFCLLNVRRVGQVHLFYRATLLSERLNPGLETMQARLFT EDEVPWDELAFRTVKETLTCYFADRKTGAMGMHFIDIE >Mature_198_residues MFCRYHPPTRLPQPGMTYRSPIQHCRACGAAVVYRRPDDGDTKQRAVCPACHTVHYENPLNVVGTVPALPDGRVLLCQRN IEPRRGRWTLPAGFMELDETTSEGAARETDEEAGAQIEMGPLFCLLNVRRVGQVHLFYRATLLSERLNPGLETMQARLFT EDEVPWDELAFRTVKETLTCYFADRKTGAMGMHFIDIE
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22469; Mature: 22469
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCRYHPPTRLPQPGMTYRSPIQHCRACGAAVVYRRPDDGDTKQRAVCPACHTVHYENPL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHEECCHHHEEECCCCC NVVGTVPALPDGRVLLCQRNIEPRRGRWTLPAGFMELDETTSEGAARETDEEAGAQIEMG CEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCHHHCCCCCCCCCCCCHHHCCCEEECC PLFCLLNVRRVGQVHLFYRATLLSERLNPGLETMQARLFTEDEVPWDELAFRTVKETLTC CEEEEEEHHHCCEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE YFADRKTGAMGMHFIDIE EEECCCCCCCCEEEEECC >Mature Secondary Structure MFCRYHPPTRLPQPGMTYRSPIQHCRACGAAVVYRRPDDGDTKQRAVCPACHTVHYENPL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHEECCHHHEEECCCCC NVVGTVPALPDGRVLLCQRNIEPRRGRWTLPAGFMELDETTSEGAARETDEEAGAQIEMG CEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCHHHCCCCCCCCCCCCHHHCCCEEECC PLFCLLNVRRVGQVHLFYRATLLSERLNPGLETMQARLFTEDEVPWDELAFRTVKETLTC CEEEEEEHHHCCEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE YFADRKTGAMGMHFIDIE EEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA