| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is tauD [H]
Identifier: 121610729
GI number: 121610729
Start: 4202172
End: 4202975
Strand: Direct
Name: tauD [H]
Synonym: Veis_3809
Alternate gene names: 121610729
Gene position: 4202172-4202975 (Clockwise)
Preceding gene: 121610728
Following gene: 121610735
Centisome position: 75.49
GC content: 63.31
Gene sequence:
>804_bases ATGACAAAGCCCAAAGTGACACCGCTGACCGGTTCCATCGGCGCCAGCGTCGAAGGCATCGATCTGAACAAACCTGTCGA CGATGCGACATTCGCCGCGCTGCACGACGCCTTCCTCACGCATTGCGTGCTGGTTTACCGTGGCCAGCAGTTGCAGCCTG CAGCCCAGGTCGAATTCGCCCGCTGCTGGGGCACGCCGTTGAACACCAACCCGCTGATCAAGCACATCGAATCGCACCCC GAGATCGTGCAAGTGACCAAAATCCCCAAGGCGACCGCATCGACCGAGGCCTGGCACTACGACTCGCCGTACATACCGGT CCCGCCCAAGATTTCGATCCTTTCGGCCGTGACGGTGCCCCACGGGGGCGACACCATGTGGTGCAACCAGTGCCTGTCTT ACGACCGGCTGTCGCCGACGATGAAAGGCGCACTGGAGGGCCTGCGCGTGAAATTCGTCGGCTTGCGCCTGGGCCGCATG ATGGGCGCCGATGCGGCCAGCCTGCCGTCGGCCGTGCATCCGCTGGTGCGCACCCATCCGGAGACCGGCCGCAAGGCGCT GTATGTCGGCCACCGCGAAACGGCGCAACTCATCGATGGCATGACGGCCGAGGAAAGCCGCCCGCTGCTCGACTTCCTGT ATCAGCATTCGACGAGCCCGGACAACATCTACCGCCACATGTGGCAGCCAGGCGATGTCGTGATGTGGGACAACCGCTGC ACCATGCACTACGCCGTTCACGACTATGGCGAAGCCGAGCGGGTGCTCAACCGCATCACCATCGAAGGCGAAACGCCGCA ATGA
Upstream 100 bases:
>100_bases TTTGCGCTGGACGACATCCATGCAGCCCATGCCTACATGATGGAGAGTCGGCATTTCGGCAAGATCGTCCTGACCATCGA TTGAACCGTGAGGAGACGAG
Downstream 100 bases:
>100_bases AACGCGACCCGATGGCGCGTGATGGGCGCAGGATGGCGCGCCGCGCGCGCATCCCTGCGCCTGGCCGCGCAGCGCCTGAC GCAATGGCTGCGGACAACTG
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTKPKVTPLTGSIGASVEGIDLNKPVDDATFAALHDAFLTHCVLVYRGQQLQPAAQVEFARCWGTPLNTNPLIKHIESHP EIVQVTKIPKATASTEAWHYDSPYIPVPPKISILSAVTVPHGGDTMWCNQCLSYDRLSPTMKGALEGLRVKFVGLRLGRM MGADAASLPSAVHPLVRTHPETGRKALYVGHRETAQLIDGMTAEESRPLLDFLYQHSTSPDNIYRHMWQPGDVVMWDNRC TMHYAVHDYGEAERVLNRITIEGETPQ
Sequences:
>Translated_267_residues MTKPKVTPLTGSIGASVEGIDLNKPVDDATFAALHDAFLTHCVLVYRGQQLQPAAQVEFARCWGTPLNTNPLIKHIESHP EIVQVTKIPKATASTEAWHYDSPYIPVPPKISILSAVTVPHGGDTMWCNQCLSYDRLSPTMKGALEGLRVKFVGLRLGRM MGADAASLPSAVHPLVRTHPETGRKALYVGHRETAQLIDGMTAEESRPLLDFLYQHSTSPDNIYRHMWQPGDVVMWDNRC TMHYAVHDYGEAERVLNRITIEGETPQ >Mature_266_residues TKPKVTPLTGSIGASVEGIDLNKPVDDATFAALHDAFLTHCVLVYRGQQLQPAAQVEFARCWGTPLNTNPLIKHIESHPE IVQVTKIPKATASTEAWHYDSPYIPVPPKISILSAVTVPHGGDTMWCNQCLSYDRLSPTMKGALEGLRVKFVGLRLGRMM GADAASLPSAVHPLVRTHPETGRKALYVGHRETAQLIDGMTAEESRPLLDFLYQHSTSPDNIYRHMWQPGDVVMWDNRCT MHYAVHDYGEAERVLNRITIEGETPQ
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=274, Percent_Identity=35.7664233576642, Blast_Score=167, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6322971, Length=281, Percent_Identity=30.9608540925267, Blast_Score=108, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 29629; Mature: 29498
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPKVTPLTGSIGASVEGIDLNKPVDDATFAALHDAFLTHCVLVYRGQQLQPAAQVEFA CCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RCWGTPLNTNPLIKHIESHPEIVQVTKIPKATASTEAWHYDSPYIPVPPKISILSAVTVP HHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECC HGGDTMWCNQCLSYDRLSPTMKGALEGLRVKFVGLRLGRMMGADAASLPSAVHPLVRTHP CCCCHHHHHHHHCHHHCCHHHHHHHHHHEEEEEHHHHHHHHCCCHHHCCHHHHHHHHCCC ETGRKALYVGHRETAQLIDGMTAEESRPLLDFLYQHSTSPDNIYRHMWQPGDVVMWDNRC CCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCE TMHYAVHDYGEAERVLNRITIEGETPQ EEEEEECCCCHHHHHHHHEEECCCCCC >Mature Secondary Structure TKPKVTPLTGSIGASVEGIDLNKPVDDATFAALHDAFLTHCVLVYRGQQLQPAAQVEFA CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RCWGTPLNTNPLIKHIESHPEIVQVTKIPKATASTEAWHYDSPYIPVPPKISILSAVTVP HHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECC HGGDTMWCNQCLSYDRLSPTMKGALEGLRVKFVGLRLGRMMGADAASLPSAVHPLVRTHP CCCCHHHHHHHHCHHHCCHHHHHHHHHHEEEEEHHHHHHHHCCCHHHCCHHHHHHHHCCC ETGRKALYVGHRETAQLIDGMTAEESRPLLDFLYQHSTSPDNIYRHMWQPGDVVMWDNRC CCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCE TMHYAVHDYGEAERVLNRITIEGETPQ EEEEEECCCCHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]