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The map label for this gene is yogA [H]

Identifier: 121610728

GI number: 121610728

Start: 4201184

End: 4202155

Strand: Direct

Name: yogA [H]

Synonym: Veis_3808

Alternate gene names: 121610728

Gene position: 4201184-4202155 (Clockwise)

Preceding gene: 121610727

Following gene: 121610729

Centisome position: 75.47

GC content: 65.74

Gene sequence:

>972_bases
ATGAAAGCAGTCAGAGTCATTGCGCATCCCGATGGCGGGCGCATCGAAGTGCAGGAGATCGCCCGGCCCACGGTCGGGCC
TGGCCAGGTGCTCGTGCGCGCACGCGCATCCGGGCTCAACCGCGGCGAGATCACGCAGGCCAGAGACAGGCGCGCCGGCG
ACCCGATGACGGTCGGCGTGGAATTTGCCGGCGAAGTCGCCGAAGTCGGCAGCGAAGTCACTGCATGGCGCGAGGGCGAC
CGCGTCATGGGACATGGGCGCGCGTGCCAGGCGCAATTCGTCCTTGCAGATCCGCTGGCCATCATGCCGGTGCCGTCCAC
CGTCTCCTGGATCGAGGCGGCGTCGTTTCCGAATGCATTCATCACCGCGCACGATGCGGTGATCACCAACGGACAGTTGC
AGCCGGGCGAGTCGATCCTCGTCAATGGCGCATCAGGCGGCGTGGCCTGGGCGGCGCTGCAGATCGCTGCGCTTTGGCCG
GCCCGTCCCGTGATGGCGATGTCCCGCTCGGCAGAAAAACTGGCGCGCCTGGCGCAGTTCGGCGTCGATGTGGGCATCGA
TTCGTCGAGCCAGTCGCAGGTCGAGCAGGTGATGTCCGCAACCGGAAAGCGCGGCGTCGATGTCGTGATCGACCAGGTCG
GCGCGCCGGTGTTCGAAGCCAACGTGCAGAGCATGGCGGTAGGGGGGCGTTACGTGAACATTGCCAGGCTGGGAGGGCGC
AACGCGCAGCTCGACCTCGAACAGCTCTGGCTCAAGCGCCTGAAGCTGATCGGCGTCACCTTCCGCACCCGCTCCGAACA
GCAGCGAATCCAGTGTGTGCAGGCCTGCGCGCGCGACATGCTCCCGTTCCTGAAGGACGGCCGCATCCGCTGGGCCATCG
ACCGCAGTTTTGCGCTGGACGACATCCATGCAGCCCATGCCTACATGATGGAGAGTCGGCATTTCGGCAAGATCGTCCTG
ACCATCGATTGA

Upstream 100 bases:

>100_bases
GCAAGCGAGGCCGCGCAGCGCGCCCTCTCGCTGCTCGAATCGATACGTGCCCGCGCTCGCGCCGCGTGACGCCGGCAACC
TGCAACCCTTGGAGAAATAC

Downstream 100 bases:

>100_bases
ACCGTGAGGAGACGAGATGACAAAGCCCAAAGTGACACCGCTGACCGGTTCCATCGGCGCCAGCGTCGAAGGCATCGATC
TGAACAAACCTGTCGACGAT

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKAVRVIAHPDGGRIEVQEIARPTVGPGQVLVRARASGLNRGEITQARDRRAGDPMTVGVEFAGEVAEVGSEVTAWREGD
RVMGHGRACQAQFVLADPLAIMPVPSTVSWIEAASFPNAFITAHDAVITNGQLQPGESILVNGASGGVAWAALQIAALWP
ARPVMAMSRSAEKLARLAQFGVDVGIDSSSQSQVEQVMSATGKRGVDVVIDQVGAPVFEANVQSMAVGGRYVNIARLGGR
NAQLDLEQLWLKRLKLIGVTFRTRSEQQRIQCVQACARDMLPFLKDGRIRWAIDRSFALDDIHAAHAYMMESRHFGKIVL
TID

Sequences:

>Translated_323_residues
MKAVRVIAHPDGGRIEVQEIARPTVGPGQVLVRARASGLNRGEITQARDRRAGDPMTVGVEFAGEVAEVGSEVTAWREGD
RVMGHGRACQAQFVLADPLAIMPVPSTVSWIEAASFPNAFITAHDAVITNGQLQPGESILVNGASGGVAWAALQIAALWP
ARPVMAMSRSAEKLARLAQFGVDVGIDSSSQSQVEQVMSATGKRGVDVVIDQVGAPVFEANVQSMAVGGRYVNIARLGGR
NAQLDLEQLWLKRLKLIGVTFRTRSEQQRIQCVQACARDMLPFLKDGRIRWAIDRSFALDDIHAAHAYMMESRHFGKIVL
TID
>Mature_323_residues
MKAVRVIAHPDGGRIEVQEIARPTVGPGQVLVRARASGLNRGEITQARDRRAGDPMTVGVEFAGEVAEVGSEVTAWREGD
RVMGHGRACQAQFVLADPLAIMPVPSTVSWIEAASFPNAFITAHDAVITNGQLQPGESILVNGASGGVAWAALQIAALWP
ARPVMAMSRSAEKLARLAQFGVDVGIDSSSQSQVEQVMSATGKRGVDVVIDQVGAPVFEANVQSMAVGGRYVNIARLGGR
NAQLDLEQLWLKRLKLIGVTFRTRSEQQRIQCVQACARDMLPFLKDGRIRWAIDRSFALDDIHAAHAYMMESRHFGKIVL
TID

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=321, Percent_Identity=31.1526479750779, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI22538444, Length=321, Percent_Identity=31.1526479750779, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI194239674, Length=332, Percent_Identity=25.3012048192771, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI13236495, Length=332, Percent_Identity=25.3012048192771, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI18379349, Length=310, Percent_Identity=27.741935483871, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI41872631, Length=323, Percent_Identity=30.3405572755418, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI28557745, Length=316, Percent_Identity=26.2658227848101, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI194239676, Length=168, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI47519420, Length=350, Percent_Identity=24.5714285714286, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI24308257, Length=347, Percent_Identity=20.4610951008646, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI226510941, Length=331, Percent_Identity=25.3776435045317, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=25.0764525993884, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17507255, Length=328, Percent_Identity=27.4390243902439, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319520, Length=316, Percent_Identity=21.8354430379747, Blast_Score=73, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24581345, Length=272, Percent_Identity=26.8382352941176, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221330659, Length=274, Percent_Identity=25.5474452554745, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI19920632, Length=274, Percent_Identity=25.5474452554745, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34884; Mature: 34884

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVRVIAHPDGGRIEVQEIARPTVGPGQVLVRARASGLNRGEITQARDRRAGDPMTVGV
CCCEEEEECCCCCEEEHHHHCCCCCCCHHEEEEEHHCCCCCCCCCHHHHHCCCCCEEEEH
EFAGEVAEVGSEVTAWREGDRVMGHGRACQAQFVLADPLAIMPVPSTVSWIEAASFPNAF
HHCCHHHHCCCHHHHHCCCCEEECCCCCCEEEEEEECCEEEEECCCCHHHHHHCCCCCEE
ITAHDAVITNGQLQPGESILVNGASGGVAWAALQIAALWPARPVMAMSRSAEKLARLAQF
EEECCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GVDVGIDSSSQSQVEQVMSATGKRGVDVVIDQVGAPVFEANVQSMAVGGRYVNIARLGGR
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHEEECCEEEEEEEECCC
NAQLDLEQLWLKRLKLIGVTFRTRSEQQRIQCVQACARDMLPFLKDGRIRWAIDRSFALD
CCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
DIHAAHAYMMESRHFGKIVLTID
HHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKAVRVIAHPDGGRIEVQEIARPTVGPGQVLVRARASGLNRGEITQARDRRAGDPMTVGV
CCCEEEEECCCCCEEEHHHHCCCCCCCHHEEEEEHHCCCCCCCCCHHHHHCCCCCEEEEH
EFAGEVAEVGSEVTAWREGDRVMGHGRACQAQFVLADPLAIMPVPSTVSWIEAASFPNAF
HHCCHHHHCCCHHHHHCCCCEEECCCCCCEEEEEEECCEEEEECCCCHHHHHHCCCCCEE
ITAHDAVITNGQLQPGESILVNGASGGVAWAALQIAALWPARPVMAMSRSAEKLARLAQF
EEECCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GVDVGIDSSSQSQVEQVMSATGKRGVDVVIDQVGAPVFEANVQSMAVGGRYVNIARLGGR
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHEEECCEEEEEEEECCC
NAQLDLEQLWLKRLKLIGVTFRTRSEQQRIQCVQACARDMLPFLKDGRIRWAIDRSFALD
CCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
DIHAAHAYMMESRHFGKIVLTID
HHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]