| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610704
Identifier: 121610704
GI number: 121610704
Start: 4172463
End: 4173302
Strand: Direct
Name: 121610704
Synonym: Veis_3781
Alternate gene names: NA
Gene position: 4172463-4173302 (Clockwise)
Preceding gene: 121610703
Following gene: 121610706
Centisome position: 74.95
GC content: 71.07
Gene sequence:
>840_bases ATGCACATCGATGTCGACGGCCACCCGATCTATGGCTACACCGGCGGCAAGGCCCTGGTTGCGGCCCAGCCCACCGTGGT CTTCATCCACGGCGTTCTGAACGACCACAGCGTCTGGGCCTTGCAAAGCCGCTACCTGGCCCACCATGGCTGGAACGTGC TGGCCATCGACCTGCCGGGCCATGGCCGCAGCGCTGGCGCTGCGCCCGCCACGGTCGAGGAGGGGGCGGACTTTGTGCTG GCGCTGCTGGACGCAGTGGGCGCGCTGCCGGGCGGCATGGGTGCGCAGCGCGCCGCCCTGGTAGGCCACAGTTGGGGATC GCTGATCGCGCTGGAGGCTGCGGCGCGGCTGCGCGAGCGCATCAGCCGCCTGGCGCTGGTGGGCACGGCCTTTCCGATGA AGGTCGCGCCGGCGCTGATGGCGGCCGCGCTCGATGACCCGCACCAGGCGCTGCGCATGGTCAACCTGCTGTCGCGCAGC ACGCTGGCAGCGCCGCCGTCGGCCCTGGGGCCTGGCACCTGGGTGTTCGGCGCCAGCATGGCCCTGGGGCGCAAGCTGCT GCGCAACCATTCGGCGGTCAACCTTTTCCACCGTGGTTTGCTGGCCTGCGACAGCTACGCCAACGGCGCGGCCGCCATCG CGCAACTGCGCTGCCCGGTGCTGTTTGCGCTCGGCGCGCAAGACCGGATGACCCCGCCCCAGGCGGCCCAGGGCTTGATC CGTGCTGCGCAAGCCGCCGGCCAACGGGTGCAGATCGCCCATCTGCCCGTGGGGCACCACCCGATGACCGAAGCGCCGGA AGAAACGCTGTGCGCGCTGCGCGCTTTTCTGGCCGGGTAA
Upstream 100 bases:
>100_bases AGGGCCAGATCCGCCTGTCGATCGGGCTGGAAGACGCCGACGACCTGATCGACGACCTGCAGCGCGCCCTCAGGGCCGCC GAGAAAGCAGGGGCCTGACC
Downstream 100 bases:
>100_bases ATTCTGACTGTTCTGACTGTTCTGACCGGATCGACGCGCGGGGCAGCCATGCAGTGGCGCACCCGGGAGAGCGGACTGCC GCTGGTGCCGCTGGTGCCGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase Protein; Carboxylesterase; Hydrolase Alpha/Beta Fold Family; Glutamate Decarboxylase-Like PLP-Dependent Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Hydolase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MHIDVDGHPIYGYTGGKALVAAQPTVVFIHGVLNDHSVWALQSRYLAHHGWNVLAIDLPGHGRSAGAAPATVEEGADFVL ALLDAVGALPGGMGAQRAALVGHSWGSLIALEAAARLRERISRLALVGTAFPMKVAPALMAAALDDPHQALRMVNLLSRS TLAAPPSALGPGTWVFGASMALGRKLLRNHSAVNLFHRGLLACDSYANGAAAIAQLRCPVLFALGAQDRMTPPQAAQGLI RAAQAAGQRVQIAHLPVGHHPMTEAPEETLCALRAFLAG
Sequences:
>Translated_279_residues MHIDVDGHPIYGYTGGKALVAAQPTVVFIHGVLNDHSVWALQSRYLAHHGWNVLAIDLPGHGRSAGAAPATVEEGADFVL ALLDAVGALPGGMGAQRAALVGHSWGSLIALEAAARLRERISRLALVGTAFPMKVAPALMAAALDDPHQALRMVNLLSRS TLAAPPSALGPGTWVFGASMALGRKLLRNHSAVNLFHRGLLACDSYANGAAAIAQLRCPVLFALGAQDRMTPPQAAQGLI RAAQAAGQRVQIAHLPVGHHPMTEAPEETLCALRAFLAG >Mature_279_residues MHIDVDGHPIYGYTGGKALVAAQPTVVFIHGVLNDHSVWALQSRYLAHHGWNVLAIDLPGHGRSAGAAPATVEEGADFVL ALLDAVGALPGGMGAQRAALVGHSWGSLIALEAAARLRERISRLALVGTAFPMKVAPALMAAALDDPHQALRMVNLLSRS TLAAPPSALGPGTWVFGASMALGRKLLRNHSAVNLFHRGLLACDSYANGAAAIAQLRCPVLFALGAQDRMTPPQAAQGLI RAAQAAGQRVQIAHLPVGHHPMTEAPEETLCALRAFLAG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29044; Mature: 29044
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIDVDGHPIYGYTGGKALVAAQPTVVFIHGVLNDHSVWALQSRYLAHHGWNVLAIDLPG CEECCCCCEEEEECCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC HGRSAGAAPATVEEGADFVLALLDAVGALPGGMGAQRAALVGHSWGSLIALEAAARLRER CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH ISRLALVGTAFPMKVAPALMAAALDDPHQALRMVNLLSRSTLAAPPSALGPGTWVFGASM HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ALGRKLLRNHSAVNLFHRGLLACDSYANGAAAIAQLRCPVLFALGAQDRMTPPQAAQGLI HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH RAAQAAGQRVQIAHLPVGHHPMTEAPEETLCALRAFLAG HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MHIDVDGHPIYGYTGGKALVAAQPTVVFIHGVLNDHSVWALQSRYLAHHGWNVLAIDLPG CEECCCCCEEEEECCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC HGRSAGAAPATVEEGADFVLALLDAVGALPGGMGAQRAALVGHSWGSLIALEAAARLRER CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH ISRLALVGTAFPMKVAPALMAAALDDPHQALRMVNLLSRSTLAAPPSALGPGTWVFGASM HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ALGRKLLRNHSAVNLFHRGLLACDSYANGAAAIAQLRCPVLFALGAQDRMTPPQAAQGLI HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH RAAQAAGQRVQIAHLPVGHHPMTEAPEETLCALRAFLAG HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA