| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610706
Identifier: 121610706
GI number: 121610706
Start: 4174720
End: 4175181
Strand: Direct
Name: 121610706
Synonym: Veis_3783
Alternate gene names: NA
Gene position: 4174720-4175181 (Clockwise)
Preceding gene: 121610704
Following gene: 121610707
Centisome position: 74.99
GC content: 72.73
Gene sequence:
>462_bases ATGACCGCATCCCCTGCCGCCCCACGCCCTGCCCCGCATTCGGCCCGCTGCAACCACGGCGTCACCGCCACACGCTGGCT GGCCAGCGGCAGTTTGCTGGCGCTGATCGCCCTGTGCCTGGCCTGGGAGTTGGTGCTGGCGCCGCTGCGGCCCGGCGGCT CATGGCTGGCGCTCAAGGCGCTGGCACTGTGCCTGCCGCTGGCCGGCCTGCTGAAGAACCGCATGTACACCTACCGCTGG GTCAGCCTGGTGGTCTGGCTTTACTTCACCGAAGGCGTGGTGCGCGGCTGGGGGGACAGGCCCCCGTCGCAATGGCTGGC CTGGGGCGAGGCGGCGCTGTGCCTGGTGCTGTTTGCCGCTTGCGCAGCGCATGTGCGATTGCGCCAGCGCAATCACGCGC CGGTGGCGCCGGCCCGCTCGCAGGCCGAGACACCCGAGCGCGCCGCGCCGCCCGCCCACTGA
Upstream 100 bases:
>100_bases CAGGGAAAGCGCGACAGATCGCCGAGCAGCGCCTCGATGCGCCGGGCCGCCACCGACAACGAAAAAGGCAAGGACATGAC CGATATGATGCCACCACACC
Downstream 100 bases:
>100_bases AGAAAAGAACCCCGCCCATGACCCCCTTGCTCGACACCCTTGCCGCCCTGGTCGGCCCGGCCCATGTGATCACCGACGGC GATCTTTGCGCCTGGGAGCA
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTASPAAPRPAPHSARCNHGVTATRWLASGSLLALIALCLAWELVLAPLRPGGSWLALKALALCLPLAGLLKNRMYTYRW VSLVVWLYFTEGVVRGWGDRPPSQWLAWGEAALCLVLFAACAAHVRLRQRNHAPVAPARSQAETPERAAPPAH
Sequences:
>Translated_153_residues MTASPAAPRPAPHSARCNHGVTATRWLASGSLLALIALCLAWELVLAPLRPGGSWLALKALALCLPLAGLLKNRMYTYRW VSLVVWLYFTEGVVRGWGDRPPSQWLAWGEAALCLVLFAACAAHVRLRQRNHAPVAPARSQAETPERAAPPAH >Mature_152_residues TASPAAPRPAPHSARCNHGVTATRWLASGSLLALIALCLAWELVLAPLRPGGSWLALKALALCLPLAGLLKNRMYTYRWV SLVVWLYFTEGVVRGWGDRPPSQWLAWGEAALCLVLFAACAAHVRLRQRNHAPVAPARSQAETPERAAPPAH
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16588; Mature: 16456
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPAAPRPAPHSARCNHGVTATRWLASGSLLALIALCLAWELVLAPLRPGGSWLALKA CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LALCLPLAGLLKNRMYTYRWVSLVVWLYFTEGVVRGWGDRPPSQWLAWGEAALCLVLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH CAAHVRLRQRNHAPVAPARSQAETPERAAPPAH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TASPAAPRPAPHSARCNHGVTATRWLASGSLLALIALCLAWELVLAPLRPGGSWLALKA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LALCLPLAGLLKNRMYTYRWVSLVVWLYFTEGVVRGWGDRPPSQWLAWGEAALCLVLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH CAAHVRLRQRNHAPVAPARSQAETPERAAPPAH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA