| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610677
Identifier: 121610677
GI number: 121610677
Start: 4149685
End: 4150236
Strand: Direct
Name: 121610677
Synonym: Veis_3754
Alternate gene names: NA
Gene position: 4149685-4150236 (Clockwise)
Preceding gene: 121610676
Following gene: 121610678
Centisome position: 74.54
GC content: 58.33
Gene sequence:
>552_bases ATGGCCCGCAGAGTCGATCTCCAACTCTACGAGACGGCAAAGGTGATGGCCAAGATGCAGGCTCGCGCTTGTGTCATCAG CCGCATCACCGGCCTGTCAATCGCCGATACCCGGAAAATCTGGCACGACGAAATGGGGCGAAGCTCCCCGAGCGGGCAGC AGCCCAACGATGATCAGTGGTTCCTGAAATCGCCTCTCCGGCGTATGCATGGGGCACTGATTCTTCAGTTGTATGCGCGC GCGCAAAAAGCCATGCCACCGCATGCCGCATTCACCCACGCTTACTACCATTACGCCCGGTTGACGGCCGGCTTGGCGCC GCGCTCGACTTGGCAAGGCGACCCCGCATTCCGGCAGAGCGAGGACGATTATGTCATTCCGTTTTTGCGGGCGCATTTCC TGACGCTTCTCTACACCGACGAAACACTGTCGGATGGACAGCGCAAATGCAATCTCCAGACTCGGCGCTGCAAGTCCTGC GGCACGCTCTATCTGGGCCATGTCGAAGAAGTCAGTAGCAAATGTCCAATTTGCGTGGCACAGAAGAAGTGA
Upstream 100 bases:
>100_bases TTCAAAGCATCGTTCAGTCCGGGTTCGGATCACAGGAAGCAATATCGATCGTCCTGAAGTCCATGCCGCTGGAATTGATG ACGAAGGCAAGGAGGCGCTG
Downstream 100 bases:
>100_bases TTTCTGTTTTGCAACCATCAAACCGCCTTCGGGCGGTTTCTTTGTTTGATGGCCAGACAGATCAGAGGCCATGCCCAATC GCAGATCGACGGAACGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MARRVDLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQWFLKSPLRRMHGALILQLYAR AQKAMPPHAAFTHAYYHYARLTAGLAPRSTWQGDPAFRQSEDDYVIPFLRAHFLTLLYTDETLSDGQRKCNLQTRRCKSC GTLYLGHVEEVSSKCPICVAQKK
Sequences:
>Translated_183_residues MARRVDLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQWFLKSPLRRMHGALILQLYAR AQKAMPPHAAFTHAYYHYARLTAGLAPRSTWQGDPAFRQSEDDYVIPFLRAHFLTLLYTDETLSDGQRKCNLQTRRCKSC GTLYLGHVEEVSSKCPICVAQKK >Mature_182_residues ARRVDLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQWFLKSPLRRMHGALILQLYARA QKAMPPHAAFTHAYYHYARLTAGLAPRSTWQGDPAFRQSEDDYVIPFLRAHFLTLLYTDETLSDGQRKCNLQTRRCKSCG TLYLGHVEEVSSKCPICVAQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20874; Mature: 20743
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRVDLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH FLKSPLRRMHGALILQLYARAQKAMPPHAAFTHAYYHYARLTAGLAPRSTWQGDPAFRQS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EDDYVIPFLRAHFLTLLYTDETLSDGQRKCNLQTRRCKSCGTLYLGHVEEVSSKCPICVA CCCEEHHHHHHHHHHHHCCCCHHHCHHHHCCCHHHHHHHCCCEEECCHHHHHCCCCEEEE QKK CCC >Mature Secondary Structure ARRVDLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH FLKSPLRRMHGALILQLYARAQKAMPPHAAFTHAYYHYARLTAGLAPRSTWQGDPAFRQS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EDDYVIPFLRAHFLTLLYTDETLSDGQRKCNLQTRRCKSCGTLYLGHVEEVSSKCPICVA CCCEEHHHHHHHHHHHHCCCCHHHCHHHHCCCHHHHHHHCCCEEECCHHHHHCCCCEEEE QKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA