| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610678
Identifier: 121610678
GI number: 121610678
Start: 4150382
End: 4151305
Strand: Direct
Name: 121610678
Synonym: Veis_3755
Alternate gene names: NA
Gene position: 4150382-4151305 (Clockwise)
Preceding gene: 121610677
Following gene: 121610679
Centisome position: 74.56
GC content: 63.2
Gene sequence:
>924_bases ATGCCCCACCTCAATGCTGTCGAGAGATCCATGCCGGCCCCTTGTGCTGATGGTGATGTGAGAACTCCCATGAGACACCC GAGCCGACCGGCGTTGCGCTACCACGGGGGCAAATTCCGGCTCGCTCCGTGGATCATGAAGTTTTTCCCGCCCCACAATG TCTACACCGAGGCTTATGGCGGTGCGGCTGGGGTGCTGCTGCAAAAGCCACGCAGCCACGGCGAGGTGTACAACGATCTG GACGGCCACATCGTGGCGTTCTTTCGTTGCCTGCGCGAGCCGAACAAGCGCGACGAACTGGTGCAGGCGATCACGCTGAC GCCCTATGCACGCGCCGAGTTCGAGCTGGCATGGGAGCCGGCGCCGGAGCAGGACATTGTCGAGCAGGCCCGTCGCACGG TGATACGCGCCCAAATGGGCTTTGGCTCTGGCGGCGCCACGAAGGGCCGCGTAGGGCTGCGCATTGACACCATGCGCAAA TACACCACTGCGCAGATGAATTGGGCGAAGTACCCGAGTGTGCTGCTGCAGGTTGCCGAACGGTTCCAGGCGGTGCTGAT CGAGAACCGCCCGGCCATCGATGTGCTGGAGCAGCATGACAGCGCCGACACGCTGCACTTCATCGACCCACCATATGTTC CCAGCACCAGGGTGACAGATGCCGCTTACGCACACGAGATGAGCGCCGCTGACCACGGCGAACTACTGGACATGGCGCAG AAACTCAAAGGAATGATCGTGTTGTCCGGCTATCCCTGTGCGCTGTACGAAGCGCGCCTGCCCGGCTGGCGCTCGTTCAG GACACGGGCGCGTATCAGCAGTGGACGCGGGACTGCCCTGCGCACCGAGGTGGTGTGGCTCAACCCCACCTGCGAGCGCG CCCTCAGTGGCTGTGCGGGGGATCTTTTTGCGCAGGTGACGTGA
Upstream 100 bases:
>100_bases TTGATGGCCAGACAGATCAGAGGCCATGCCCAATCGCAGATCGACGGAACGCAGCGCCATTCGAGCTTGAACTGTCTGCG TTTCATTGCAGGATGGACCC
Downstream 100 bases:
>100_bases ACTTGGTGGATGGCGATATCGCAAATTCGAATGAGGACGTGAAGGACTTTGAAATGGAACAACCCATCGAGCAAACCATC GTGGAGATCACGCGCGAGCT
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: Methyltransferase; DNA Adenine Methylase; Site-Specific DNA Methylase; DNA Adenine Methyltransferase; Adenine-Specific DNA Methyltransferase; Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage Methylase; Phage DNA Methylase; Phage-Related Methylase; Prophage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; DNA Adenine Methylase Subfamily; Prophage DNA Methylase
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPHLNAVERSMPAPCADGDVRTPMRHPSRPALRYHGGKFRLAPWIMKFFPPHNVYTEAYGGAAGVLLQKPRSHGEVYNDL DGHIVAFFRCLREPNKRDELVQAITLTPYARAEFELAWEPAPEQDIVEQARRTVIRAQMGFGSGGATKGRVGLRIDTMRK YTTAQMNWAKYPSVLLQVAERFQAVLIENRPAIDVLEQHDSADTLHFIDPPYVPSTRVTDAAYAHEMSAADHGELLDMAQ KLKGMIVLSGYPCALYEARLPGWRSFRTRARISSGRGTALRTEVVWLNPTCERALSGCAGDLFAQVT
Sequences:
>Translated_307_residues MPHLNAVERSMPAPCADGDVRTPMRHPSRPALRYHGGKFRLAPWIMKFFPPHNVYTEAYGGAAGVLLQKPRSHGEVYNDL DGHIVAFFRCLREPNKRDELVQAITLTPYARAEFELAWEPAPEQDIVEQARRTVIRAQMGFGSGGATKGRVGLRIDTMRK YTTAQMNWAKYPSVLLQVAERFQAVLIENRPAIDVLEQHDSADTLHFIDPPYVPSTRVTDAAYAHEMSAADHGELLDMAQ KLKGMIVLSGYPCALYEARLPGWRSFRTRARISSGRGTALRTEVVWLNPTCERALSGCAGDLFAQVT >Mature_306_residues PHLNAVERSMPAPCADGDVRTPMRHPSRPALRYHGGKFRLAPWIMKFFPPHNVYTEAYGGAAGVLLQKPRSHGEVYNDLD GHIVAFFRCLREPNKRDELVQAITLTPYARAEFELAWEPAPEQDIVEQARRTVIRAQMGFGSGGATKGRVGLRIDTMRKY TTAQMNWAKYPSVLLQVAERFQAVLIENRPAIDVLEQHDSADTLHFIDPPYVPSTRVTDAAYAHEMSAADHGELLDMAQK LKGMIVLSGYPCALYEARLPGWRSFRTRARISSGRGTALRTEVVWLNPTCERALSGCAGDLFAQVT
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34319; Mature: 34187
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLNAVERSMPAPCADGDVRTPMRHPSRPALRYHGGKFRLAPWIMKFFPPHNVYTEAYG CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHCCCCCCHHHCCC GAAGVLLQKPRSHGEVYNDLDGHIVAFFRCLREPNKRDELVQAITLTPYARAEFELAWEP CCCHHEEECCCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECC APEQDIVEQARRTVIRAQMGFGSGGATKGRVGLRIDTMRKYTTAQMNWAKYPSVLLQVAE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHH RFQAVLIENRPAIDVLEQHDSADTLHFIDPPYVPSTRVTDAAYAHEMSAADHGELLDMAQ HHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH KLKGMIVLSGYPCALYEARLPGWRSFRTRARISSGRGTALRTEVVWLNPTCERALSGCAG HHCCEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHCCHH DLFAQVT HHHEECC >Mature Secondary Structure PHLNAVERSMPAPCADGDVRTPMRHPSRPALRYHGGKFRLAPWIMKFFPPHNVYTEAYG CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHCCCCCCHHHCCC GAAGVLLQKPRSHGEVYNDLDGHIVAFFRCLREPNKRDELVQAITLTPYARAEFELAWEP CCCHHEEECCCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECC APEQDIVEQARRTVIRAQMGFGSGGATKGRVGLRIDTMRKYTTAQMNWAKYPSVLLQVAE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHH RFQAVLIENRPAIDVLEQHDSADTLHFIDPPYVPSTRVTDAAYAHEMSAADHGELLDMAQ HHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH KLKGMIVLSGYPCALYEARLPGWRSFRTRARISSGRGTALRTEVVWLNPTCERALSGCAG HHCCEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHCCHH DLFAQVT HHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA