| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610617
Identifier: 121610617
GI number: 121610617
Start: 4083540
End: 4083971
Strand: Direct
Name: 121610617
Synonym: Veis_3690
Alternate gene names: NA
Gene position: 4083540-4083971 (Clockwise)
Preceding gene: 121610609
Following gene: 121610618
Centisome position: 73.36
GC content: 65.51
Gene sequence:
>432_bases ATGCCACGCACAAGGTTGTCCTCCATGCCTTCGATGACTCTCCAGGAAAGGATCGAATCGAGCCTCTCCCGCTCGGAGGC CAAGGTGTTCCTGCGCAAGGAATTCGACCGCTTCGGCGGCTACGACCAAGTGGGGCGCGCCCTGCGCGGCATCATCGCCA AGGGCCTGCTGGTCAAGGCGGGGTATGGCATCTACGTCAAGGCCAAGAAGTCGAGCATCACGGGCAACCCGGTGCCAGTC GCTCCACTGATCGAGGTCGGCGCCGCAGCGCTGGCCAAGCTCGGGGGGCAGGCCCAGCCGAGCTCGGCTGCGGCCACCTA CATGGCCGGCCGCTCCACCCAGATGCCCATGGGCGACGCGCTCTGCGTCGGCAGTTCACGCGTGCGCCGCAAGATCGGCT TTGCAAGCAAAACGGTGAGGTTCGAGCGTTGA
Upstream 100 bases:
>100_bases CTGCTGTGCAACAGCCTTGGAAAAACCGTCTGCGCCGATGGTCTGAAAGAAGGCGGCCAGTTCGAGCACGGCTGGGGATG GCTACGCGGGGTCATGCTGT
Downstream 100 bases:
>100_bases GGAGGTTGCCGGCCGCCGACATCGAGAAGATCGTCGATTTCGCCGCAGAAGCCGGAGAACTGCTGCCGCCCTACGCCCTC GAAAAAGACGCCCACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPRTRLSSMPSMTLQERIESSLSRSEAKVFLRKEFDRFGGYDQVGRALRGIIAKGLLVKAGYGIYVKAKKSSITGNPVPV APLIEVGAAALAKLGGQAQPSSAAATYMAGRSTQMPMGDALCVGSSRVRRKIGFASKTVRFER
Sequences:
>Translated_143_residues MPRTRLSSMPSMTLQERIESSLSRSEAKVFLRKEFDRFGGYDQVGRALRGIIAKGLLVKAGYGIYVKAKKSSITGNPVPV APLIEVGAAALAKLGGQAQPSSAAATYMAGRSTQMPMGDALCVGSSRVRRKIGFASKTVRFER >Mature_142_residues PRTRLSSMPSMTLQERIESSLSRSEAKVFLRKEFDRFGGYDQVGRALRGIIAKGLLVKAGYGIYVKAKKSSITGNPVPVA PLIEVGAAALAKLGGQAQPSSAAATYMAGRSTQMPMGDALCVGSSRVRRKIGFASKTVRFER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15325; Mature: 15194
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTRLSSMPSMTLQERIESSLSRSEAKVFLRKEFDRFGGYDQVGRALRGIIAKGLLVKA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEC GYGIYVKAKKSSITGNPVPVAPLIEVGAAALAKLGGQAQPSSAAATYMAGRSTQMPMGDA CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE LCVGSSRVRRKIGFASKTVRFER EECCCHHHHHHHCCCCCCEECCC >Mature Secondary Structure PRTRLSSMPSMTLQERIESSLSRSEAKVFLRKEFDRFGGYDQVGRALRGIIAKGLLVKA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEC GYGIYVKAKKSSITGNPVPVAPLIEVGAAALAKLGGQAQPSSAAATYMAGRSTQMPMGDA CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE LCVGSSRVRRKIGFASKTVRFER EECCCHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA